Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02782 GTGACCTGTGTATGTGCCGTTGGAGTTGCTACTGCATTTAGAGCTCTAGTTGGTGGTGTGTTGTTTGCTTTGGAAGAGATTACATGTTGGCAGGGGAAAACACATTTCTTCTACCTTTACTCTAGTCTGAGTTGGGTTTTCTTAGGAAGGAGAGACGAGACCCGGCAGCCCAGGCTCGACGTGACCAGTGTTAGATTCGCAGGATTCAACTGCTCGCGTTTTGGGTTTTCTCTGCGTTTTGATTCACGTTTCAAGTTCATTGATGCAGATTGGTTTGTTGTGCAAAAAAGAAGACCCTGGTGGTTGTCACTTATTAGGGATTTCTATGATTGCGGTCGATATTTGTAA 348 0.4483 VTCVCAVGVATAFRALVGGVLFALEEITCWQGKTHFFYLYSSLSWVFLGRRDETRQPRLDVTSVRFAGFNCSRFGFSLRFDSRFKFIDADWFVVQKRRPWWLSLIRDFYDCGRYL 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02782 115 Gene3D Clc chloride channel 1 71 - -
Vimu10g02782 115 SUPERFAMILY Clc chloride channel 1 43 IPR014743 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02782 Vimu-Chr10 39221985 39223781 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g02782 1 30 Ion Channels AT5G33280 66.667 2.25e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02782 K05016 - sspl:121808543 48.9062