LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu10g02751	ATGAAAACCCATCAACAACCAAAGCTAAAAACCCAACTTTTCTCTTGTGGCTTCTTCCGCCACTGCGCCCAAACCGTTCTAAGCCCCACCGGCGCCACCCCACCTCTTCCTCACACTCCCCCAACCTTCCAATGTGAATCCTCCACCTCCTCCTCTTCCTCCACCACTTCCCAAAGCTTCACCCAGTGGAGATTCTCTCCCCCAACTCCCACTCCCAACACCGCCACCGCTACCACCACCACCAATAACACCAACAACCTCATCAAAACAAACACAAACACAAGCTTTAATGTTCCTCTTCCTCCTCCACCGCCACTGCCACCACAAATCCACAACCTCCAAGAACTCTTCCACATTTCAGAACTCCAACTAACAACAGACCCAGCTTCTGCCCTTCAACTTCTAGAACGTTCTCTCGTTCCCAACCCACCTCAAGACCAACCCCCTTGTCCTCCCAACCTCATGCACGCTCTCACGCGCAACCTCGCGCTCGCCAAACCCGCCACCAAGATCCTCTTCGCGCTCTGCCTCTCCGATGTCAACCGCCGTGTCGCCGTCGAGACCGGCGCCGTCTCCGCCGTCATCGAGGCCGCCCTCGAACTCGACGGCGCCCCCTCCGAGCGCGCCCTCGCTGCCCTCGAGCTCATGTGCACGCTGCCCGATGGCGCTCACGAAGTCCGCGCTCACGCCCTCGCCGTCCCCGTCATGGTTACCATGATGGGAAAGACCGCTGCCCGCGCCAAAGAATACGCCATTGGAGTCCTGGCCGTCGTGTACGGTGGCTCCACATCTGACCACCACACCGCTCCCCCGGAGGAGGTGGCGCGTGCGGTGGAACTCGCGCTCCAGGGTGAGTGCAGCCCTCGGGCTAGGAGGAAAGGTGCCCAGCTGTTGAAAACGCTGAAACAACTCTCTGAAGCTGAGCCTCTCCCTCTGGACAACAATTGA	948	0.5918	MKTHQQPKLKTQLFSCGFFRHCAQTVLSPTGATPPLPHTPPTFQCESSTSSSSSTTSQSFTQWRFSPPTPTPNTATATTTTNNTNNLIKTNTNTSFNVPLPPPPPLPPQIHNLQELFHISELQLTTDPASALQLLERSLVPNPPQDQPPCPPNLMHALTRNLALAKPATKILFALCLSDVNRRVAVETGAVSAVIEAALELDGAPSERALAALELMCTLPDGAHEVRAHALAVPVMVTMMGKTAARAKEYAIGVLAVVYGGSTSDHHTAPPEEVARAVELALQGECSPRARRKGAQLLKTLKQLSEAEPLPLDNN	315

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu10g02751	315	SUPERFAMILY	ARM repeat	142	301	IPR016024	-
	Vimu10g02751	315	Gene3D	-	127	308	IPR011989	-
	Vimu10g02751	315	MobiDBLite	consensus disorder prediction	32	91	-	-
	Vimu10g02751	315	PANTHER	ARM REPEAT SUPERFAMILY PROTEIN	1	308	-	-
	Vimu10g02751	315	MobiDBLite	consensus disorder prediction	42	91	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vimu10g02751	166	303	U-box Gene Family	AT1G49780	35.971	2.74e-17	80.1

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu10g02751	-		-	gmx:100814020	442.965

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vimu10g02751	10	38876853	38878287	Vimu10g02751	10	38876853	38878287	ECH