Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02740 ATGGCATCATCCTTAATGTTACCAGCTGCTTCAATGCTGAGATCATCTGCCACTTCATCGTCTACTTCACGAAGACTTGCTCTCTTTCACCTTGTCACCACTGGTGCTATTGCTCTCCCACAATGTAAGCTGTTTGGTGCAAAAGGATCAGATTTGTTAAAAGTAGCAGAGGCTTCTGCTGCGGAAAATATAGTCCAGCCAGATAATTTTTTGTTTGATTGGGTTAAGAATGACAACAGAAGATTTCTCCATGTTGTGTACCGTGTTGGGGACTTGGAGAAGACTATAAAGTTCTACACTGAATGCCTTGGCATGAAGCTTTTGAGGAAACGTGATATACCTGAAGATAGATACTCTAACGCTTTTCTTGGATATGGGCCCGAAGATTCTAATTTTACAGTTGAACTTACTTACAATTATGGAGTTGATAACTATGACATTGGAAGTGGCTTTGGTCATTTTGGTGTTGCAGTTGAAGATATTTACAAGAGAGTAGATCTAATAAAGGCAAAAGGAGGAAAGGTTACAAGGGAACCAGGGCCTGTTAGAGATGGCAGTTCGGTAATTGCTTTCATTGAAGATCCTGATGGTTATAAGTTTGAACTTTTGGAGAGAAGACCTACATCTGAACCTCTATGCCAAGTGATGCTTCGAGTAGGCGATCTCGATCATGCCATAGCCTTCTACCAAAAAGCTGTCGGAATGAAACTTCTCCGCAAGAAGGACAATCCTGAAGACAAGTATACTGTAGCCTTTTTGGGCTATGGTCCTGAAGATAAGAATACTGTTCTAGAACTAACATATAACTATGGCGTTACTGATTACGACAAAGGAAATGGCTACGCTCAGATTGCAATAGGCACAAATGATGTCTATAAGGCTGCAGAAGCAATCAAATTATGTGGGGGGAAGATTATCCGTGAACCTGGGCCCTTGCCTGGTATCAACACCAAGATTGTAGCTTGTTTGGACCCTGATGGCTGGAAATTGGTATCACCTTTTAATCCATTTTCTTATGTGTTTTATCACTTTCTCTGA 1038 0.4104 MASSLMLPAASMLRSSATSSSTSRRLALFHLVTTGAIALPQCKLFGAKGSDLLKVAEASAAENIVQPDNFLFDWVKNDNRRFLHVVYRVGDLEKTIKFYTECLGMKLLRKRDIPEDRYSNAFLGYGPEDSNFTVELTYNYGVDNYDIGSGFGHFGVAVEDIYKRVDLIKAKGGKVTREPGPVRDGSSVIAFIEDPDGYKFELLERRPTSEPLCQVMLRVGDLDHAIAFYQKAVGMKLLRKKDNPEDKYTVAFLGYGPEDKNTVLELTYNYGVTDYDKGNGYAQIAIGTNDVYKAAEAIKLCGGKIIREPGPLPGINTKIVACLDPDGWKLVSPFNPFSYVFYHFL 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02740 345 NCBIfam lactoylglutathione lyase 82 206 IPR004361 GO:0004462|GO:0046872
Vimu10g02740 345 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 81 205 IPR037523 -
Vimu10g02740 345 ProSitePatterns Glyoxalase I signature 1. 84 105 IPR018146 GO:0004462|GO:0046872
Vimu10g02740 345 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 211 335 IPR037523 -
Vimu10g02740 345 Gene3D - 208 332 IPR029068 -
Vimu10g02740 345 FunFam Lactoylglutathione lyase 208 334 - -
Vimu10g02740 345 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 80 207 IPR029068 -
Vimu10g02740 345 PANTHER LACTOYLGLUTATHIONE LYASE 61 331 - -
Vimu10g02740 345 CDD GlxI_Ni 83 203 - -
Vimu10g02740 345 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 214 330 IPR004360 -
Vimu10g02740 345 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 82 202 IPR004360 -
Vimu10g02740 345 Gene3D - 54 207 IPR029068 -
Vimu10g02740 345 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 212 330 IPR029068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02740 Vimu-Chr10 38774111 38776495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g02740 212 328 Calmodulin-binding Proteins AT1G08110 28.169 1.39e-10 58.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02740 10 38774111 38776495 Vimu10g02740 10 38774111 38776495 ECH