Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02696 ATGGTTGTGGCATGCAGGGCAATTAAAAAAGCCATTTGCTTTCACAGAGAAGGCCATGATGCTTATTGCAAGTTTTCAAATAATCCCTATATGATTGGTTTTGGGGTCGTGCAACTTTTATTGTCTCAAACCCCAAATTTCCATAAGTTAACGTGGATTTCAACCGTTGCTGCCGCTACCTCTTTTGGTTATGCTTTCATTGGAAGCGGGCTTTCTCTGGCAGTGTTGGTCCAAGGTACTATAGCACTCACCTATATTAATTCCGAGGTTTTAGTTTTTATACTATATATTTTCAAAGAATGCCGCTAG 309 0.3981 MVVACRAIKKAICFHREGHDAYCKFSNNPYMIGFGVVQLLLSQTPNFHKLTWISTVAAATSFGYAFIGSGLSLAVLVQGTIALTYINSEVLVFILYIFKECR 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02696 102 Pfam Transmembrane amino acid transporter protein 7 73 IPR013057 -
Vimu10g02696 102 PANTHER OS05G0424000 PROTEIN-RELATED 1 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02696 Vimu-Chr10 38380782 38381090 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g02696 7 91 Organic Solute Cotransporters AT1G10010 50.588 5.79e-24 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02696 K24917 - gmx:100781934 139.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02696 10 38380782 38381090 Vimu10g02696 10 38380782 38381090 ECH
Vimu10g02696 10 38380782 38381090 Vimu6g03709 6 35135167 35160306 PCT