Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vimu10g02644 | ATGGCTATGGCAGACAATAGGCGAAGAATTCTTCCTTATCCAGAAGATCGGTTACCTGGAAGATGCCAAACCTTGGGCTTCGCAGAAGCTGTCCTACTAACCAATCCCAAAGACCCACAATTGCAAGGAGAGGTGGATGACAAGTATCAGTATTCATGTGCAAACAAGGATAATCAAGTTCATGGGTGGATATCTTTCAGTCCACCAGTAGGCTTCTGGCAGATCACACCTAGTGATGAGTTTCGTTCTGGTGGACCCCTCAAACAAAATTTGACGTCACACGTAGGCCCCACCACACTTGCAATGTTTATTAGTGGTCACTATGCGGGACAAGATTTGGTGCCTAAAATTAGAGGTGGTGAATCGTGGAAGAAGGTTTTCGGTCCTGTATATATTTATCTCAATTCTGCACCAGTTGGTGACGACCCACTTTGGTTATGGGAGGATGCAAAAATACAGATGATGAATGAAGTTCAAAGTTGGCCATATCATTTCCCAGCTTCAGAGGATTTTTTAAAATCGGATCAGCGGGGCAACGTCAGTGGCAGATTACTTGTCTTAGACAAGTACATCTGCACAGACTTAATATCAGCAAATGGTGCTTATGTTGGCCTGGCCCCACCTGGAGATGCAGGGTCATGGCAAAGAGAATGCAAGGACTATCAATTCTGGACCAGAGCGGATGAGAATGGATTTTTTACCATTAGAAATGTACGTCCAGGAGACTATAACCTTTTTGCTTGGGTGCCTGGCTTTGTTGGGGACTACAAATTTGTAGATTATATGAAGATAACGCCAGGTTCTTACACTGAATTGGGTGAACTTGTATATGAGCCTCCAAGAGATGGTCCTACATTGTGGGAAATAGGTATTCCTGATAGATCTGCTGCGGAATTTTATGCTCCTGATCCCAATCCCCAATACATGAATAGGCTTTTTATCAACCATCCAGACAGGTTCAGGCAGTATGGATTGTGGGAAAGGTATACAGAATTGTATCCTGATGCAGATTTGGTTTACACAGTTGGTGTTAGTGACTATACGAAGGACTGGTTTTATGCGCAGGCTCCGAGGAAAAAAGAGGATAACACTCTTCAAGGGACCACCTGGCAAATCAAGTTCGAAGTCAGAAGCGTGGTTAAGGGAAGTACATACAAACTGAGAGTTGCAATTGCATCTGCAACATTAGCTGAATTGCAGGTGGTGATGGAAAATGGCATACTAAAAGTCACTTTATCAAATCCTGGGGGAATTGTGACTGGAATACAGTACAATAACATCGACAACTTGCTTGAAGTTTTGAATGACGAATCTAACAGAGGTAATGCAGTAATATGTTTTCAACTTCATGTAGGTATTGGGACCTTGTCTGGAGCTCGCCGACAAGTACAGCAACCAGTGAAGTTAAAGTCACACATTGTCATACGTGACTGCAGCATCAAAGGAACAGAGTTCCAAGTTATGGTTGAAAATGAGGACCAAGTTGAGGTATCCTTCACCAGGAAGTGGGACGTCTCTCTTGAAGGCAAGGTGGTTCCTTTAAACATTGACAAAAGGTTCATAATGCTTCGTGGTTGTTCGGGCTTCTACTCCTATGCAATTTATGAGCACTTACAGGAGTGGCCTGCTTTCAATCTTGACGAAACAAGAATTGCTTTCAAGCTTAGAAAAGACAAGTTCCATTATATGGCAATGGCTGATAATAGACAAAGAAACATGCCTCTTCCAGATGACAGATTACCACCTAAGGGCAAAGCCCTTGCCTACCCAGAAGCAGTTCTACTTGTCAATCCCATCGAACCAGAACTTAAGGGAGAGGTGGATGACAAGTACCAATATTCATGCGACAACAAAGACAACAAAGTTCATGGATGGATCTGCATGGATCCTGGAGTGGGATTCTGGCTTATTACGCCCACCGATGAGTTTCGATCTGGTGGGCCCCTCAAACAAAACTTAACTTCTCATGTTGGCCCCACCACGCTTGCCGTGTTTCTGAGTGCACATTATTCTGGAGAGGATTTGGTGCCTAAGTTTAATGTTGGTGAGGCATGGAAGAAAGTTTTTGGTCCTGTTTTCATTTATTTGAATTCTTCCTATGATGGAGGTGACCCCCTTAAGCTATGGGACGATGCTAAACAGCAGATGTTGGTGGAAGTTCAAAGCTGGCCCTACAGTTTCCCTGAATCAGAGGATTTTGCGAAGTGGGACGAACGTGGTAATGTTAGTGGCAGGCTTTTGGTTAGAGAGAGGTGTATAAACGATGACTATATCTCAGCAAAAGGTGCTTATGTTGGATTGGCTCTTCCAGGCGATGTGGGATCATGGCAAAGAGAATGCAAGAATTATCAGTTTTGGGCTAAAGCAGACGATGATGGCTACTTCTCCATCACCAATGTACGTGCAGGAGATTACAATGTTTACGCCTGGGTGCCTGGTTTTATTGGCTGTGAAATCGACCTTGGTGAGCTTGTGTATGAACCCCCTAGAGATGGTCCAACATTGTGGGAAATTGGCATTCCTGATCGAACAGCTGCTGAGTTCTATGTTCCTGACCCAAATCCCAAATATATCAACAAACTTTTTGTTAATCATCCTGACAAGTTTAGACAATATGGATTATGGGAGAGATATGCAGAACTCTACCCTGACAAAGACCTGATCTACACAATTGGTGTCAGTGACTACACCAAAGATTGGTTCTTTGCTCAAGTTACCAGGAAGAAAGATGACAACACATTTCAAGGAACCACTTGGCAGATAAAGTTTCAACTTGATAAGGTGAACAAAACCGGTAGCTATAAACTGCGGGTGGCTTTGGCATCTGCAACATTATCTGAACTTCAGGTTCGAGTTAATAATCCAAAGAGTCCTCGTCCTCTATTTTCAAGTGGGTTGATAGGAAGGGATAACTCGATCGCAAGGCATGGAATTCATGGACTTTATTGGCTTTACAATGTAGAGATTGCAGGAACTCAATTTGTTGAAGGAGAAAATACCATCTTTTTGACACAGAGCAGAGGAAATAGTCCATTTCAGGCAATTATGTATGATTATATTCGTCTGGAAGCTCCACCATCGTCTACCTTCAATAACACAAAGGAGAGTAGAGGAGCGGAGCTGCGGCGGCGCAAGGAGAAAGATAAAGGGAGTTCAGGAAGTAAGAGGCAAAGTGGCTTTTGA | 3183 | 0.4339 | MAMADNRRRILPYPEDRLPGRCQTLGFAEAVLLTNPKDPQLQGEVDDKYQYSCANKDNQVHGWISFSPPVGFWQITPSDEFRSGGPLKQNLTSHVGPTTLAMFISGHYAGQDLVPKIRGGESWKKVFGPVYIYLNSAPVGDDPLWLWEDAKIQMMNEVQSWPYHFPASEDFLKSDQRGNVSGRLLVLDKYICTDLISANGAYVGLAPPGDAGSWQRECKDYQFWTRADENGFFTIRNVRPGDYNLFAWVPGFVGDYKFVDYMKITPGSYTELGELVYEPPRDGPTLWEIGIPDRSAAEFYAPDPNPQYMNRLFINHPDRFRQYGLWERYTELYPDADLVYTVGVSDYTKDWFYAQAPRKKEDNTLQGTTWQIKFEVRSVVKGSTYKLRVAIASATLAELQVVMENGILKVTLSNPGGIVTGIQYNNIDNLLEVLNDESNRGNAVICFQLHVGIGTLSGARRQVQQPVKLKSHIVIRDCSIKGTEFQVMVENEDQVEVSFTRKWDVSLEGKVVPLNIDKRFIMLRGCSGFYSYAIYEHLQEWPAFNLDETRIAFKLRKDKFHYMAMADNRQRNMPLPDDRLPPKGKALAYPEAVLLVNPIEPELKGEVDDKYQYSCDNKDNKVHGWICMDPGVGFWLITPTDEFRSGGPLKQNLTSHVGPTTLAVFLSAHYSGEDLVPKFNVGEAWKKVFGPVFIYLNSSYDGGDPLKLWDDAKQQMLVEVQSWPYSFPESEDFAKWDERGNVSGRLLVRERCINDDYISAKGAYVGLALPGDVGSWQRECKNYQFWAKADDDGYFSITNVRAGDYNVYAWVPGFIGCEIDLGELVYEPPRDGPTLWEIGIPDRTAAEFYVPDPNPKYINKLFVNHPDKFRQYGLWERYAELYPDKDLIYTIGVSDYTKDWFFAQVTRKKDDNTFQGTTWQIKFQLDKVNKTGSYKLRVALASATLSELQVRVNNPKSPRPLFSSGLIGRDNSIARHGIHGLYWLYNVEIAGTQFVEGENTIFLTQSRGNSPFQAIMYDYIRLEAPPSSTFNNTKESRGAELRRRKEKDKGSSGSKRQSGF | 1060 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vimu10g02644 | 1060 | MobiDBLite | consensus disorder prediction | 1028 | 1060 | - | - | |
| Vimu10g02644 | 1060 | FunFam | Rhamnogalacturonate lyase B | 735 | 821 | - | - | |
| Vimu10g02644 | 1060 | MobiDBLite | consensus disorder prediction | 1036 | 1053 | - | - | |
| Vimu10g02644 | 1060 | Pfam | Polysaccharide lyase family 4, domain II | 199 | 271 | IPR029413 | - | |
| Vimu10g02644 | 1060 | Pfam | Polysaccharide lyase family 4, domain II | 761 | 816 | IPR029413 | - | |
| Vimu10g02644 | 1060 | Gene3D | - | 832 | 1023 | - | - | |
| Vimu10g02644 | 1060 | CDD | RGL4_M | 176 | 275 | IPR029413 | - | |
| Vimu10g02644 | 1060 | Pfam | Polysaccharide lyase family 4, domain III | 834 | 1022 | IPR029411 | - | |
| Vimu10g02644 | 1060 | Pfam | Polysaccharide lyase family 4, domain III | 285 | 405 | IPR029411 | - | |
| Vimu10g02644 | 1060 | Gene3D | - | 737 | 817 | - | - |
Showing 1 to 10 of 27 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vimu10g02644 | K18195 | - | gmx:100814721 | 1138.64 |
Showing 1 to 1 of 1 entries