Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02628 ATGAGAGCGTTGAGGAACGAGAATCACCAGATTCTGACATCCGTGACCCTTACCACCCGGAAGTACTTGGCGGTGGAGGCGGAGAACTTGGTACTGAGAGCACAGGTAAGCGAGTTGAGCCATAAGTTAGAGTCTCTGAACGAGATCAACCACTTCTTGAACGCCACCAATGGTGTCTTTGGGCCTTCGGGCCCATCTCCAACCTCCTTCCTTGAACCTGAGGGCAGTAGCAACTTCTTCAACAACCTTTTTAACATGGTATATCTCAGCCAGCCGATCATGGCTTCTGCATATATGTTGCACTTCAACGGATGTGGATAA 321 0.4953 MRALRNENHQILTSVTLTTRKYLAVEAENLVLRAQVSELSHKLESLNEINHFLNATNGVFGPSGPSPTSFLEPEGSSNFFNNLFNMVYLSQPIMASAYMLHFNGCG 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02628 106 PANTHER BZIP TRANSCRIPTION FACTOR 44 3 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02628 Vimu-Chr10 37678698 37679051 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g02628 4 102 bZIP Transcription Factor Family AT4G34590 45.000 5.28e-20 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02628 K25786 - gmx:778171 123.25