Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02626 ATGGCGGAAGGGCTGAACAGAGAACAGTACGTGTACCTGGCCAAGCTCTCGGAGCAGGCGGAGCGGTACGAGGAGATGGTGGAGTTCATGCAGAAGGTGGTGGTAGGGTGGACTCCGGCGACGGAGCTGAGCGTTGAGGAGCGCAACCTACTCTCCGTCGCGTACAAGAACGTCATCGGCTCCCTGCGTGCGGCGTGGCGGATCGTTTCTTCGATCGAGCAGAAGGAAGAGGGTCGCAAGAACGAGGAGCACGTGGCGCTCGTCAAGCACTACAGATCCAAGGTGGAGACGGAGCTCTCGAACGTGTGCGCCAGCATCCTAAACCTCTTGGACTCCAACCTCGTCCTCTCTGCCTCCAACACCGAGTCCAAGGTCTTCTATTTGAAGATGAAGGGCGATTATCACCGCTATCTCGCTGAATTTAAGGTTGGGGATGAACGAAAGGCCGCAGCTGAGGATACCATGTTGTCTTACAAGGCTGCCCAGGACGTTGCTTATGCGGATCTTCCACCCACCCACCCTATAAGATTGGGCCTTGCTCTCAATTTCTCGGTCTTCTACTATGAAATCCTCAACCAGTCTGATAAAGCGTGTGGCATGGCTAAACAGGCTTTTGAGGAAGCAATTGCTGAGCTGGACACATTGGGAGAAGAATCCTACAAAGACAGCACGCTCATAATGCAGCTTTTAAGAGACAACCTTACCCTTTGGACTTCTGATGTCCAGGACCAGCTAGATGAGCCCTGA 747 0.5382 MAEGLNREQYVYLAKLSEQAERYEEMVEFMQKVVVGWTPATELSVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVALVKHYRSKVETELSNVCASILNLLDSNLVLSASNTESKVFYLKMKGDYHRYLAEFKVGDERKAAAEDTMLSYKAAQDVAYADLPPTHPIRLGLALNFSVFYYEILNQSDKACGMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDVQDQLDEP 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02626 248 SMART 1433_4 7 247 IPR023410 -
Vimu10g02626 248 PIRSF 14-3-3 1 247 IPR000308 -
Vimu10g02626 248 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Vimu10g02626 248 Pfam 14-3-3 protein 13 238 IPR023410 -
Vimu10g02626 248 FunFam 14-3-3 protein epsilon 4 248 - -
Vimu10g02626 248 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Vimu10g02626 248 PANTHER 14-3-3 PROTEIN 7 242 IPR000308 -
Vimu10g02626 248 SUPERFAMILY 14-3-3 protein 5 240 IPR036815 -
Vimu10g02626 248 Coils Coil 13 33 - -
Vimu10g02626 248 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Vimu10g02626 248 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Vimu10g02626 248 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Vimu10g02626 248 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Vimu10g02626 248 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Vimu10g02626 248 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Vimu10g02626 248 Gene3D - 1 247 IPR036815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02626 Vimu-Chr10 37661013 37667771 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g02626 1 242 14-3-3 family AT5G65430 84.298 1.13e-152 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02626 K06630 - gmx:100818967 453.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02626 10 37661013 37667771 Vimu10g02626 10 37661013 37667771 ECH