Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02609 ATGGTGAAACATTTGAATAATTTTTCTTGTCCTTTGTCCATACATCATAGCAAGTCAAGTCAAACGCCTGGTAACGTGCCTGAAGTTTGGGGGCAACCAAAATTTGAGGGCGGTGTGCGAGACAAATGTGTCAAAGATAGGAGGCTGGATGGTGGTGAATGGAGGCTGCTTGAGATAATCCTCTTGGATCTTCTCAGAGTTATAAGTCATCATCGAGCTCGGCTAGCCACACCCATCCGCACAGTTCAAAAAATGTGCAGTGATACTGATTTCGATATCGATCCATTTGATGACACAGTTTCTTCTCGTTCCAGACCAACAAAAATCCGTCCTTTTGCACTGATAAATCCACCTTATAAAGTTAAACCTTCAACTCATTCAACTATTACAAATGAGGACAGAGATAGTAAAACAGATGAAACCTTGCCATCTGACTTCAAAGTGGACTCTGATGAATTTGTTGTGACACCAAGTTCGGTCCAGAAGACCTCCAAATCCCAAAAGTCCAAAAAGGAAAGAACAGGAAGCACTGCAAAGGAAACATCCAAAATTTTGCCAACATCCAATGAGTCTGGCTGTAGAGAGACTACAACACCATCAAAGCTAGATGATGAGAAATCTGTTGTTTCAGAGTCTTCATCTTCATCATCATCATCACTTAGTCATTCTTTGGATGAGAATATTACTCTTGATGCTGCTCTGCTGGGCACAGAGAGAAAAACTATTGCAGTTGATGAAGAATTGGTTGACTCTAGCCCTTCAGAATCACAAGAGGTTGCAGCCCATCAGAATGGGAGTGAACCTCCTATTGGCAAGGATAAGAAGGATGAGCAGAATAGATGTTGA 846 0.4173 MVKHLNNFSCPLSIHHSKSSQTPGNVPEVWGQPKFEGGVRDKCVKDRRLDGGEWRLLEIILLDLLRVISHHRARLATPIRTVQKMCSDTDFDIDPFDDTVSSRSRPTKIRPFALINPPYKVKPSTHSTITNEDRDSKTDETLPSDFKVDSDEFVVTPSSVQKTSKSQKSKKERTGSTAKETSKILPTSNESGCRETTTPSKLDDEKSVVSESSSSSSSSLSHSLDENITLDAALLGTERKTIAVDEELVDSSPSESQEVAAHQNGSEPPIGKDKKDEQNRC 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02609 281 MobiDBLite consensus disorder prediction 179 196 - -
Vimu10g02609 281 MobiDBLite consensus disorder prediction 127 144 - -
Vimu10g02609 281 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 58 278 IPR045042 -
Vimu10g02609 281 MobiDBLite consensus disorder prediction 246 281 - -
Vimu10g02609 281 MobiDBLite consensus disorder prediction 209 226 - -
Vimu10g02609 281 MobiDBLite consensus disorder prediction 96 144 - -
Vimu10g02609 281 MobiDBLite consensus disorder prediction 157 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02609 Vimu-Chr10 37499330 37500865 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g02609 58 280 Mechanosensitive Ion Channel Family AT5G10490 34.510 5.94e-20 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02609 K22047 - gmx:100797302 269.24