Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu10g02591 | ATGCCTCACAGAACCACATACATTTTCCCGCGTCAATTCCCGGAGCGAGGGTTGGATGAATCTTCCAAACAGCTGTTAGATCAAGAGAAAAAGAAAATCGTCAACTCTATCAAACATGACACGTTTAGCGTCGAAAGCGGCACTCCGAAAAAACCGATTCCGACTAAAGAAAACGACGTCGTTCTCTGCTCCGCTAAGCACTCCGCATTCTCCGACCTGTTCGCCGCCGGAGAGAAGTTCCGGACTAAACAAAAGCAAATCGCCGCGTTCTGCGATTGGCTGATCGACAAGAAAGTCAGCCACTCCGGCCACCACCAAGACCACGGCTGTGAAAGCGACCTACTTCTTCCGCGGGAAACCACCATCAAGGACGCTGCGGTTGACCAGAGCTTTGACCGGCAGATTTCGCTGCCGAGGCTATCGAGCGGGAGCAGCTATGCTGGAAGCTTGTTTTCGGGGACGACTTTTGATTGCAATTTTTCCAGCGGTATTAAGGAGGAATCGTCGTCGTCTCGCACTCTCACTACTATTGCTGCGCCGAGGCACAAGGACGATGAGGAAGAGGAGGTGGAGGAAGAGAGCATGGAGAAGTTAGCGAAGAAGTCGAAAGAGAGCTACATCTTGCAACTGACGTTAGCTAAGAGGCTCAACTTTTTGGCTAGCCTCGTTACCGAACCTGTTCTCACTCCAGGAACCGAAACCTGGGATGCCGAAGCCGTTTCTTACCGCCTATGGGTGAGTGGATGTTTATCTTACACAGACAAGATATCTGACGGGTTTTATAACATACTGGGGATGAATCCATATCTTTGGGTGATGTGTAATGATGTGGAGGACGGTAGAAGGATACCTACTTTGATGGCGCTCAAAGCGGTTGAGCCCAGCGAAACTTGTATGGAGGTGGTGCTTGTTGATAGACGCGAGGACTCTCGCTTGAAGCTGCTTCAAGATAAGGCGCAAGAGTTGTATTGTGCTTCTGAGAACACCTTGGTGTTAGTGGAGCAGCTAGGGAAACTGGTAGCCATTTATATGGGGGGTATGTTCCCGGTGGAGCAAGGCGATCTTCACAAGCGCTGGAAATTGGTTAGTAAGAAGTTGAGGACTTTGCACAAGTGTGTTGTGCTTCCCATTGGCAGCCTGTCTACTGGGCTTTGTAGGCATCGGGCAATACTTTTTAAGAGATTGGCAGATTACATAGGTTTGCCCTGTCGTATAGCTCGTGGTTGCAAGTATTGTGTTGCAGATCATAGATCCTCTTGCCTAGTCAAAATTAAGGATGACAAACAGCTCTCAAGGGAGTATGTGGTTGACCTAGTTGGGGAACCCGGAAATGTCCATGGACCAGATTCCTCAATAAATGGAGCATATGTTTCTTCAATGCCTTCCCCGTTTCAAATTTGTCACTTAAAAGAATCACAATCAACTTATATGGATGACATGGCAAGTTCTGAATCCGCAGGTTCCAATGACAGACCTGTTAATCCTGAAAATCTTCCATATTCAGGCTGTGGAAATAATGATCAACAAGCTAAAGAAACTGATTTGCTGAGAAGCTCCATTTATGGTTCAGTTGATCAAATCTGTGAAGTTACAGAACCATCTCTAGTTCCTTTTGGATTAGAAGGGAATGACGAGGAATGCTCAGTTATTAGTTCGGTTTTGCCTACCATCCATGAAGATGATTCTAAAATTCTCCATCCAGACATCGAAGCATCACTAAATGAATATCCAAGTCTTAGGGAAGATGTAGTACAATTACAAGAAATTTCCAACAATGAGATCATTGTAAATGGAAGTTCTGCAGTGAAAAGTAGTTTCAAGCGATCTATACTTGGTTCATGCAGCCAGTCAGAACTGAAACAGGTAGACAATAGAAGCGAAAACAAGGGTTGTTTACCTTCTGGGAATATTCCAAGATATTTGAATCTTGAACCATCACTTGCAATGGACTGGCTTGAGATATCGTGGGAGGATTTAAGAATTAAAGAGCGTGTTGGTGCTGGTTCATTCGGTACAGTGTACCGTGCTGAATGGCATGGATCGGATGTTGCAGTCAAGGTTTTAACAGTTCAGGATTTCCATGATGATCAGTTGAAGGAGTTCCTGAGAGAGGTTGCAATAATGAAGCGGGTTCGCCATCCTAATGTGGTGCTCTTCATGGGCTCTGTTACAAAACGCCCCCATCTATCAATAGTGACAGAGTATTTGCCTAGGGGTAGTTTATACCGCCTGATACACAGACCAGCATCTGGTGAAATTCTGGACAAGAGGAAGAGACTGCGGATGGCATTGGATGTGGCTAAAGGAATCAATTATCTCCACTGTCTGAAACCTCCAATTGTGCACTGGGATCTCAAATCCCCAAACTTGTTAGTGGATAAAAATTGGACTGTGAAGGTTTGTGATTTTGGATTGTCCAGATTTAAGGCAAACACTTTCATACCGTCCAAATCAGTTGCTGGAACACCTGAGTGGATGGCTCCAGAATTTCTTCGTGGAGAACCCTCCAATGAGAAATCTGACGTATACAGTTTTGGAGTTATCCTGTGGGAACTTGTGACCATGCAACAGCCATGGAGTGGACTTAGCCCTGCACAGGTGGTTGGAGCTGTTGCTTTCCAGAATAGGAGGCTGGCTATCCCTCCGAACATCTCCCCAGCATTGGCCTCCCTCATGGAATCTTGTTGGGCGGATGAGCCTAGTGAGAGGCCATCTTTTGGTAGCATAGTTGAGTCACTAAAAAAGCTGGTAAAATCTCCGGCAGAACTGATAAAGATGGCAGATACATAG | 2790 | 0.4591 | MPHRTTYIFPRQFPERGLDESSKQLLDQEKKKIVNSIKHDTFSVESGTPKKPIPTKENDVVLCSAKHSAFSDLFAAGEKFRTKQKQIAAFCDWLIDKKVSHSGHHQDHGCESDLLLPRETTIKDAAVDQSFDRQISLPRLSSGSSYAGSLFSGTTFDCNFSSGIKEESSSSRTLTTIAAPRHKDDEEEEVEEESMEKLAKKSKESYILQLTLAKRLNFLASLVTEPVLTPGTETWDAEAVSYRLWVSGCLSYTDKISDGFYNILGMNPYLWVMCNDVEDGRRIPTLMALKAVEPSETCMEVVLVDRREDSRLKLLQDKAQELYCASENTLVLVEQLGKLVAIYMGGMFPVEQGDLHKRWKLVSKKLRTLHKCVVLPIGSLSTGLCRHRAILFKRLADYIGLPCRIARGCKYCVADHRSSCLVKIKDDKQLSREYVVDLVGEPGNVHGPDSSINGAYVSSMPSPFQICHLKESQSTYMDDMASSESAGSNDRPVNPENLPYSGCGNNDQQAKETDLLRSSIYGSVDQICEVTEPSLVPFGLEGNDEECSVISSVLPTIHEDDSKILHPDIEASLNEYPSLREDVVQLQEISNNEIIVNGSSAVKSSFKRSILGSCSQSELKQVDNRSENKGCLPSGNIPRYLNLEPSLAMDWLEISWEDLRIKERVGAGSFGTVYRAEWHGSDVAVKVLTVQDFHDDQLKEFLREVAIMKRVRHPNVVLFMGSVTKRPHLSIVTEYLPRGSLYRLIHRPASGEILDKRKRLRMALDVAKGINYLHCLKPPIVHWDLKSPNLLVDKNWTVKVCDFGLSRFKANTFIPSKSVAGTPEWMAPEFLRGEPSNEKSDVYSFGVILWELVTMQQPWSGLSPAQVVGAVAFQNRRLAIPPNISPALASLMESCWADEPSERPSFGSIVESLKKLVKSPAELIKMADT | 929 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu10g02591 | 929 | FunFam | Serine/threonine-protein kinase isoform 1 | 649 | 737 | - | - | |
Vimu10g02591 | 929 | ProSiteProfiles | Protein kinase domain profile. | 659 | 917 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu10g02591 | 929 | Pfam | Ethylene-responsive protein kinase Le-CTR1 | 237 | 445 | - | - | |
Vimu10g02591 | 929 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 243 | 918 | - | - | |
Vimu10g02591 | 929 | Pfam | Protein tyrosine and serine/threonine kinase | 659 | 913 | IPR001245 | GO:0004672|GO:0006468 | |
Vimu10g02591 | 929 | FunFam | Serine/threonine-protein kinase CTR1 | 738 | 923 | - | - | |
Vimu10g02591 | 929 | Gene3D | Transferase(Phosphotransferase) domain 1 | 738 | 925 | - | - | |
Vimu10g02591 | 929 | CDD | STKc_MAP3K-like | 665 | 913 | - | - | |
Vimu10g02591 | 929 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 780 | 792 | IPR008271 | GO:0004672|GO:0006468 | |
Vimu10g02591 | 929 | SMART | serkin_6 | 659 | 917 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu10g02591 | 929 | ProSitePatterns | Protein kinases ATP-binding region signature. | 665 | 686 | IPR017441 | GO:0005524 | |
Vimu10g02591 | 929 | PRINTS | Tyrosine kinase catalytic domain signature | 733 | 746 | IPR001245 | GO:0004672|GO:0006468 | |
Vimu10g02591 | 929 | PRINTS | Tyrosine kinase catalytic domain signature | 884 | 906 | IPR001245 | GO:0004672|GO:0006468 | |
Vimu10g02591 | 929 | PRINTS | Tyrosine kinase catalytic domain signature | 840 | 862 | IPR001245 | GO:0004672|GO:0006468 | |
Vimu10g02591 | 929 | PRINTS | Tyrosine kinase catalytic domain signature | 774 | 792 | IPR001245 | GO:0004672|GO:0006468 | |
Vimu10g02591 | 929 | Gene3D | Phosphorylase Kinase; domain 1 | 652 | 736 | - | - | |
Vimu10g02591 | 929 | SUPERFAMILY | Protein kinase-like (PK-like) | 637 | 912 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu10g02591 | Vimu-Chr10 | 37317103 | 37324131 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu10g02591 | 1 | 927 | MAP Kinase Kinase Kinase | AT4G24480 | 56.148 | 0.0 | 1050 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | TKL_CTR1-DRK-2 | Vimu10g02591 | PK_Tyr_Ser-Thr | 1.9e-65 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu10g02591 | - | - | gmx:100808435 | 1607.81 |