Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02512 ATGGACTATCCCAGTCCAACTTCAAATTCTGATTCCGGAACCCGGAAATGGGTTTCTTTTGAAATTTGGATTCAGGGTGTCAGTCAAGAGATTTGTGTTGAGAATTGGCGGCTTTGTTATGCAATCAAATACTTATCCTCCCTTCTACATATGTCACCTGTACTAGCAGGACTATTCAATTTCTTTGTGTTGGTTGCTTTACAGCTTGTAGCAGCACGTTCTTCATCCAGCACTGGTAAGGGGAAAAATCATGAAGGCTCAATAAAGTATGGTTTCAGCCTTGTAAAAGGGAAAGCTAATCACCCAATGGAGGACTATCATGTTGCCAAGTTTGCTCAGATAAAAGACAATGAATTGGGTTTATTTGCTATCTATGATGGCCATTTGGGTGACCGTGTGCCTGCCTACTTACAGAAACATTTGTTTACCAACATTCTGCGGGAGGAGGAATTTTGGGAAGACCCCACTCTTTCCATCTCAAAAGCTTACGAGATTACAGATCAGGAAATTCTATCAAACAGTTCTGACCTTGGGCGTGGTGGATCAACAGCCGTAACTGCTATATTGATCAATGGGCGAAGGTTATGGATAGCTAATGTTGGAGACTCACGAGCTGTTCTTTCTAGAAAAGGTCAAGCTTTACAAATGACTATAGACCACGAGCCAAACATGGAACGAGGTAGCATTGAGAATAGAGGTGGCTTTGTCTCTAATTTGCCAGGTGATGTGCCTAGAGTAAATGGACAACTTGCTGTTTCTCGAGCATTTGGTGACAAGAGTCTCAAGTCACATTTGCGATCAGACCCTGATGTGCAGAACACTGACATAGATGTTGATACTGAGATTCTAATAATTGCAAGTGATGGACTTTGGAAGGTAATGACTAATCAAGACGCTGTGGATATTGCTAGAAGATCGAAAGACCCACAGAAGGCAGCTAAGCAACTTACTGCTGAAGCATTAAAAAGAGATAGTAAAGATGATATATCTTGTGTTGTGGTTAAATTCAGGTGA 1014 0.4152 MDYPSPTSNSDSGTRKWVSFEIWIQGVSQEICVENWRLCYAIKYLSSLLHMSPVLAGLFNFFVLVALQLVAARSSSSTGKGKNHEGSIKYGFSLVKGKANHPMEDYHVAKFAQIKDNELGLFAIYDGHLGDRVPAYLQKHLFTNILREEEFWEDPTLSISKAYEITDQEILSNSSDLGRGGSTAVTAILINGRRLWIANVGDSRAVLSRKGQALQMTIDHEPNMERGSIENRGGFVSNLPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDVQNTDIDVDTEILIIASDGLWKVMTNQDAVDIARRSKDPQKAAKQLTAEALKRDSKDDISCVVVKFR 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02512 337 SMART PP2C_SIG_2 100 336 IPR001932 -
Vimu10g02512 337 FunFam Probable protein phosphatase 2C 39 80 337 - -
Vimu10g02512 337 CDD PP2Cc 88 336 IPR001932 -
Vimu10g02512 337 Gene3D - 84 337 IPR036457 -
Vimu10g02512 337 SMART PP2C_4 85 334 IPR001932 -
Vimu10g02512 337 ProSiteProfiles PPM-type phosphatase domain profile. 89 336 IPR001932 -
Vimu10g02512 337 SUPERFAMILY PP2C-like 87 336 IPR036457 -
Vimu10g02512 337 Pfam Protein phosphatase 2C 98 329 IPR001932 -
Vimu10g02512 337 PANTHER PROTEIN PHOSPHATASE 84 336 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02512 Vimu-Chr10 36364902 36367231 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g02512 57 337 PP2C-type Phosphatase Gene Family AT1G22280 72.474 1.15e-146 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02512 K17506 - gmx:100797292 514.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02512 10 36364902 36367231 Vimu10g02512 10 36364902 36367231 ECH