Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02497 ATGGCGGCCGCTCCTACGCCTCGCGAAGAGAACGTGTACATGGCGAAGCTCGCTGAGCAGGCCGAGCGCTACGAAGAAATGGTGGAGTTCATGGAGAAGGTGTCCGCTGCCGCAGACAACGAGGAACTCAACGTCGAGGAGAGGAATCTCCTCTCCGTAGCCTACAAGAACGTGATCGGAGCGCGCCGCGCCTCGTGGCGCATCATCTCCTCAATCGAGCAGAAGGAAGAGAGCCGCGGCAACGAGGATCACGTCACCGTCATCCGCGACTACCGATCCAAGATCGAGTCCGAGCTCTCCAACATCTGCGACGGTATTCTTAAGCTCCTCGACTCTCGCCTTATTCCCTCGGCTTCCTCCGGCGATTCTAAGGTCTTCTACCTCAAGATGAAGGGCGATTACCACAGGTACCTCGCCGAGTTCAAGACCGGCGCTGAGCGCAAGGAGGCTGCTGAGTGCACTCTCGCTGCATACAAATCGGCTCAGGACATTGCAAATGCCGAACTGCCTCCAACTCATCCAATTAGGCTCGGCCTTGCTCTGAACTTCTCCGTATTTTACTATGAAATCCTTAACTCTCCTGATCGCGCCTGCAACCTTGCAAAACAGGCTTTTGATGAAGCGATTGCTGAATTGGATACACTGGGAGAGGAGTCATACAAGGATAGCACTTTGATCATGCAACTGCTTCGTGATAACCTCACCCTTTGGACCTCGGACATGCAGGATGATGGAGCAGATGAAATTAAAGAAGCAGCACCGAAACAGGATGATCAGTAG 780 0.5385 MAAAPTPREENVYMAKLAEQAERYEEMVEFMEKVSAAADNEELNVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVTVIRDYRSKIESELSNICDGILKLLDSRLIPSASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAECTLAAYKSAQDIANAELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAPKQDDQ 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02497 259 Coils Coil 14 41 - -
Vimu10g02497 259 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Vimu10g02497 259 SUPERFAMILY 14-3-3 protein 8 240 IPR036815 -
Vimu10g02497 259 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Vimu10g02497 259 SMART 1433_4 8 251 IPR023410 -
Vimu10g02497 259 PANTHER 14-3-3 PROTEIN 8 242 IPR000308 -
Vimu10g02497 259 FunFam 14-3-3 protein epsilon 4 251 - -
Vimu10g02497 259 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Vimu10g02497 259 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Vimu10g02497 259 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Vimu10g02497 259 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Vimu10g02497 259 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Vimu10g02497 259 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Vimu10g02497 259 Pfam 14-3-3 protein 14 238 IPR023410 -
Vimu10g02497 259 Gene3D - 2 251 IPR036815 -
Vimu10g02497 259 PIRSF 14-3-3 2 250 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02497 Vimu-Chr10 36155681 36157454 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g02497 6 255 14-3-3 family AT1G78300 92.032 1.69e-170 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02497 K06630 - gmx:100529128 493.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02497 10 36155681 36157454 Vimu10g02497 10 36155681 36157454 ECH