Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02468 ATGAAAATCCCGAATCCCATACTCACGCTCTTCATCCTCTTGAACCCTCCCCTAGTGCTGGCAAACATAGAAACATGTTCAGACAGCGTTTGCCAGGTTCGAGAGCCAGTAATCCGATTTCCCTTCCGCATAGAAGGACAACACGCAGAACCATGCGGATACCCAGGCTTCATAGTCTCCTGCAATCAGAACGCCCAAACACACCTCAACCTACCAAATTGGGGTCCACTCAAAATCCAAACTATAAACTACGCCGCGCAGCAACTGTGGGTCAACGATCCCGACAACTGCCTCCCCAAACGCCTCCTCTCTCTCAATCTCTCTGTCTCTCCCTTCCGCGCCGTTTACCACCAGCAATTCACCTTCTTCAACTGCTCCGTCAAATTGCCCAACCTCGTTCGTCGATACCGTCCCATAGGTTGTCTCAGCGATTCTCCCAAGTACGCCGTTTTCGCCACGCCTTCTACTACTGTGGTTGGCCACTTGTCTTCCGTGTGTGATTTCGTGGCCACGGTGAAGGTGCCTGTGCAGTCACCGTTTTACGATCAAGTCACATCGTCGGAACTCGGCGAGGATCTGCGTCTCTCGTGGGATTCGCCGGCGTGCGGGAGGTGCGAGTCCCACGGTGGCAGGTGTGGCTTCAAGAGCGATGAGACTTTTGAGCTTGACTGTTATGGTTTCCCTTCGAAAGGTAGGTCCCGCCCACACTAG 711 0.5359 MKIPNPILTLFILLNPPLVLANIETCSDSVCQVREPVIRFPFRIEGQHAEPCGYPGFIVSCNQNAQTHLNLPNWGPLKIQTINYAAQQLWVNDPDNCLPKRLLSLNLSVSPFRAVYHQQFTFFNCSVKLPNLVRRYRPIGCLSDSPKYAVFATPSTTVVGHLSSVCDFVATVKVPVQSPFYDQVTSSELGEDLRLSWDSPACGRCESHGGRCGFKSDETFELDCYGFPSKGRSRPH 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02468 236 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 10 225 IPR046948 -
Vimu10g02468 236 Pfam Wall-associated receptor kinase galacturonan-binding 26 93 IPR025287 GO:0030247
Vimu10g02468 236 Pfam Wall-associated receptor kinase C-terminal 162 225 IPR032872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02468 Vimu-Chr10 35727653 35728363 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g02468 24 227 C3H Transcription Factor Family AT2G46495 35.714 1.65e-37 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02468 - - vun:114163980 452.21