Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu10g02426 | ATGGACAAGAAGCTGGCCCTTTTCTACATTTTTTCAACAGTGTTGGTTGGTGTTCTGGCTGAACCAGTGGAGGATAAGCAGGCGCTGCTTGATTTCCTTGACAGCATGAATCACTCTCCTCATGTCAACTGGGAAGAGAACACTTCTGTTTGCCAAAGCTGGAGAGGAGTGACTTGCAACTCTGACGAATCTCGAGTCACAGCCCTTCGATTGCCAGGAGCTGGTTTGAGTGGTCCAATCCCACCCAACACTCTGAGTCGCCTCTCAGCACTTGAGATTGTGAGTCTCAGATCAAATGGTATATCAGGTCCTTTCCCTGATGGTTTCTCTGAGCTGAAAAATTTGACCAGCCTCTATCTTCAATCTAACAAGTTTTCCGGGCCACTACCATTGGATTTTTCAGTTTGGAATAATCTCAGTGTTGTCAATTTATCCAACAATTATTTTAATGGGAGTATCCCTTTATCAATTTCAAATCTGACTCATCTCACTTCATTAGTCCTTGCCAACAACTCCCTTACGGGTGAGATTCCTGATCTCAATATTCCTAGCCTGGAGGAGCTGAATTTAGCCTACAATAACCTTAGTGGGGTTGTGCCTAAATCTCTTCTTAGATTTCCTAGTTCAGCCTTTTCTGGTAACAAGCTTACATCAGCAACAGCACTTCCTCCGGCCTTTCCTGTGGAACCACCGGCGGTTCCTCCAGGGGAAAAATCCAAAGGTCTCAGTGAACCTGCATTGTTGGGTATCATCATTGGTGCTTCCGTGCTGGGGTTTGTGGTGATTGCAGGTTTCTTGATTGTGTGCTGCTATCAGAATGCAGATGTGGATGTGCAGCCAATGAAATCCCAGAATAAACAAACCTCTCTGAAAACAGAATCTTCCGGAAGTCAAGACAAAAACAATAAAATTGTCTTCTTTGAGGGTAGCAATCTTGCATTTGATCTAGAGGACCTGTTGAGAGCATCTGCTGAGATTCTTGGCAAAGGTACCTTTGGCATGACATATAAGGCTGCTCTAGAGGATGCAACCACTGTGGTGGTCAAGAGGTTGAAGGAGGTCACTGTTGGAAAACGAGATTTTGAACAGCAGATGGAGGTGGTGGGGAGAATAAAGCACGACAATGTGGATGCAGTGAGGGCATATTACTACTCAAAGGAGGAGAAACTCATAGTATATGATTACTATCAACAAGGCAGCGTCTCTGCAATGTTACATGGCAAAGGAGGGGAAGGTATAAGTGCTTTAGACTGGGATAGCCGTTTGAGAATTGCAATTGGTGCAGCGAGAGGCATTGCTCGCATCCACTCACAACATGGAGGGAAACTCGTTCATGGAAACATAAAAGCCTCAAACATCTTCATCAACTCACAAGGATATGGATGCATATCTGATATTGGCTTGGCAACATTGATGAGTCCAATACCTGTTCCTGCCATGAGAACAACTGGATACCGAGCACCAGAAGTAACTGACACGCGTAAAGCAACCCATGCATCTGACGTCTACAGTTTTGGGGTGCTACTACTCGAGCTTCTGACTGGGAAATCGCCCATAAACAGCACAGAAGGTGAACAGGTCGTTCACTTGGTTAGATGGGTGAATTCTGTTGTTAGAGAGGAGTGGACTGCAGAAGTGTTTGATGTAGAGCTGTTGAGGTATCCCAACATAGAAGAAGAAATGGTGGGGATGCTACAAATAGGGATGGCTTGTGCTGCAAGGATACCGGATCAGAGACCGAAGATGCCTGATGTGGTGAAAATGGTTGAAGAGATTCGCCGTGTAAATACGCCAAATCTACCATCTACGGAGTCTCGGTCAGAAGTTTCTACACCCACACCTCGTGCAGTGGACATACCTTCTACCTCTGTTCAACAATGA | 1881 | 0.4535 | MDKKLALFYIFSTVLVGVLAEPVEDKQALLDFLDSMNHSPHVNWEENTSVCQSWRGVTCNSDESRVTALRLPGAGLSGPIPPNTLSRLSALEIVSLRSNGISGPFPDGFSELKNLTSLYLQSNKFSGPLPLDFSVWNNLSVVNLSNNYFNGSIPLSISNLTHLTSLVLANNSLTGEIPDLNIPSLEELNLAYNNLSGVVPKSLLRFPSSAFSGNKLTSATALPPAFPVEPPAVPPGEKSKGLSEPALLGIIIGASVLGFVVIAGFLIVCCYQNADVDVQPMKSQNKQTSLKTESSGSQDKNNKIVFFEGSNLAFDLEDLLRASAEILGKGTFGMTYKAALEDATTVVVKRLKEVTVGKRDFEQQMEVVGRIKHDNVDAVRAYYYSKEEKLIVYDYYQQGSVSAMLHGKGGEGISALDWDSRLRIAIGAARGIARIHSQHGGKLVHGNIKASNIFINSQGYGCISDIGLATLMSPIPVPAMRTTGYRAPEVTDTRKATHASDVYSFGVLLLELLTGKSPINSTEGEQVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEEEMVGMLQIGMACAARIPDQRPKMPDVVKMVEEIRRVNTPNLPSTESRSEVSTPTPRAVDIPSTSVQQ | 626 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu10g02426 | 626 | FunFam | Probable inactive receptor kinase RLK902 | 22 | 181 | - | - | |
Vimu10g02426 | 626 | Gene3D | Ribonuclease Inhibitor | 24 | 137 | IPR032675 | - | |
Vimu10g02426 | 626 | PANTHER | OS05G0588300 PROTEIN | 7 | 602 | - | - | |
Vimu10g02426 | 626 | FunFam | protein STRUBBELIG-RECEPTOR FAMILY 8 | 396 | 601 | - | - | |
Vimu10g02426 | 626 | FunFam | pollen receptor-like kinase 1 | 290 | 395 | - | - | |
Vimu10g02426 | 626 | Gene3D | Transferase(Phosphotransferase) domain 1 | 397 | 610 | - | - | |
Vimu10g02426 | 626 | Gene3D | Ribonuclease Inhibitor | 138 | 223 | IPR032675 | - | |
Vimu10g02426 | 626 | Gene3D | Phosphorylase Kinase; domain 1 | 285 | 395 | - | - | |
Vimu10g02426 | 626 | Pfam | Protein tyrosine and serine/threonine kinase | 325 | 537 | IPR001245 | GO:0004672|GO:0006468 | |
Vimu10g02426 | 626 | ProSiteProfiles | Protein kinase domain profile. | 321 | 600 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu10g02426 | 626 | Pfam | Leucine Rich Repeat | 184 | 204 | IPR001611 | GO:0005515 | |
Vimu10g02426 | 626 | SUPERFAMILY | L domain-like | 38 | 208 | - | - | |
Vimu10g02426 | 626 | MobiDBLite | consensus disorder prediction | 596 | 626 | - | - | |
Vimu10g02426 | 626 | SUPERFAMILY | Protein kinase-like (PK-like) | 325 | 590 | IPR011009 | - | |
Vimu10g02426 | 626 | ProSitePatterns | Protein kinases ATP-binding region signature. | 327 | 358 | IPR017441 | GO:0005524 | |
Vimu10g02426 | 626 | Pfam | Leucine rich repeat N-terminal domain | 24 | 60 | IPR013210 | - | |
Vimu10g02426 | 626 | ProSiteProfiles | Leucine-rich repeat profile. | 184 | 205 | IPR001611 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu10g02426 | Vimu-Chr10 | 35201959 | 35204609 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu10g02426 | 14 | 613 | Receptor kinase-like Gene Family | AT4G23740 | 56.459 | 0.0 | 678 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-III | Vimu10g02426 | PK_Tyr_Ser-Thr | 3.5e-31 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu10g02426 | - | - | gmx:100813065 | 1080.09 |