Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02412 ATGAGGGAATGGGGTGTGGTTGCTCTGCTGTTATCCATAGAGTTCTTGGATGTGATTGTGTACACTCTAAGCAAAGCAGCCATGAAGAAGGGCATGAATGATTTTGTGTTCGTCATGTACTCCAATGCCTTGGCATCTTGCTTACTTCTTCCCTTAACCTTATTCTTTCACAGGAAAAGACCTCCTCCGCCACTCACTTATTCCGTGGTGGTCCAAATATTTTTTAATGGCTTGTTAAGTTGCAGTGTTCAGATGCTAAGGTTTTTTGGAATCGGTTTCAGCTCTCCTACTTTAGCAACTGCAATGTCTGACTTAATCCCTGCTTTTACCTTCATACTTGCCATCTTCTTCAGGATGGAAAAATTGGATTGGAAAACTAACAGCACACGGGCCAAGTCCATTGGGACATTTGTATCAATCACTGGAGCCTTGATAATTACTCTGTACAGAGGCCAGGCAATCATAAATAATCATCCATCTAATAAATTATTTCCCAAAAACCTCGTTTCATCTGAAAATTTTGATTGGGTAATTGGAGCAGTGTTGCTTGCGGGTCATAGCTTTGTTCTCTCGTTGTTGTTTATAGTTCAGACATGGATAATCAGAAATTACCCTGCAGAGCTTATGGTGGTACTCATTCGCGGTATATTAGTAGCTCTGCTATCTGTTCCAGCTTCACTGATTTCAGCTAAGGATCCAAAGGCTTTGAAATTGGGATTTGATGTGCAGTTGATAGCTATTATATGTCAAGCAATTTTCAGCGTATCCTTTCGAAGTGTGGTTCATATATGGGTGATGGGAAAGAAGGGCCCACTCTATGTTGCAATGTTTAAGCCAATTGGAATAGTCTTTGCGGCCATAATGGGAATTTCGTTTCTGGGTGACTCTCTCTATATTGGCAGTGTGCTTGGAGCAGCCATAGTGGTGATTGGATTTTATGGTGTTCTTTGGGGGAAAAGCCAAGAGAGAACAAAGGAAGAGAGTGAAGATCATACCTTGGAATCATCCTCGCCCGTTGCCCCTCTTTTGCAGACTAAGAGAATGGGAGAATAG 1053 0.4188 MREWGVVALLLSIEFLDVIVYTLSKAAMKKGMNDFVFVMYSNALASCLLLPLTLFFHRKRPPPPLTYSVVVQIFFNGLLSCSVQMLRFFGIGFSSPTLATAMSDLIPAFTFILAIFFRMEKLDWKTNSTRAKSIGTFVSITGALIITLYRGQAIINNHPSNKLFPKNLVSSENFDWVIGAVLLAGHSFVLSLLFIVQTWIIRNYPAELMVVLIRGILVALLSVPASLISAKDPKALKLGFDVQLIAIICQAIFSVSFRSVVHIWVMGKKGPLYVAMFKPIGIVFAAIMGISFLGDSLYIGSVLGAAIVVIGFYGVLWGKSQERTKEESEDHTLESSSPVAPLLQTKRMGE 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02412 350 SUPERFAMILY Multidrug resistance efflux transporter EmrE 42 150 - -
Vimu10g02412 350 Pfam EamA-like transporter family 9 147 IPR000620 GO:0016020
Vimu10g02412 350 PANTHER WAT1-RELATED PROTEIN 7 327 IPR030184 GO:0016020|GO:0022857
Vimu10g02412 350 MobiDBLite consensus disorder prediction 326 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02412 Vimu-Chr10 35022143 35023993 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g02412 2 350 Nodulin-like Gene Family AT3G28050 41.274 7.90e-82 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02412 - - gmx:100804032 561.222