Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02411 ATGGGGAAGTTGAATCTTCCGTTTGTTGGAATGATTATGGCGGAGTTTGCTCAGGTTGGTCTAATCATATTGAGCAAAAAAGCCATGGCACAAGGAATGACCAATTTCATCTTCATCTTCTATTCCAACACAATCGCTGCCCTCCTTCTTCTTCCCATTTCCTTACTTGTACACAGATTTGAACGTCCTCCAATCACCTTTTCCATCCTTTGTGAATTCTTCCTGCTTGCACTGCTCGGGCAAGCTTTTGGGTATGCTGGGATTTACTACGGCTCAGCTACACTCAGCACATCCATCCTCAACCTCGTTCCTGGTTTTACTTTCGTGCTTGCTGTTCTTTTTAGGTTCATCCCATTTCCTTCTTCTTGCTTATATTTATTTAAACTTTTCCCACTTTCTGGTTCCAGAATGGAACAATTAGATTGGAGAAAATTTAGCAGCCTAGCTAAGTCCTTGGGAACAATAGTGTCAATTGCTGGTGCTTTTATTGTGACTTTGTACAAGGGCCCTGCACTTTTGCTGGGAGTGTCATCGGCAAACTCATCTCCAAAGCTACTTTTATCCGTAGATTCTAATTGGATACTTGCAGGATTATTTCTCGCTGCTGATTGTGTAATGACTTCCGCATATATTATTTTACAGGCTTCTATTCTTAAAAAGTATCCAGCAGAGTTGATTGTTGTATTCTTTTATTGTTTCTTTGTGGCCATTCAATCTGTCGTGACTTGTTTAGTTGTGGAAAGAGACATCAGTGCTTGGAGCTTGGAACCCAAGTTAAGGTTGCTTGCAGTGTTATACTCGGGAGTCATGGGCTCTGCATTTCAAGTTGGTATTATTTCTTGGTGTTTGCACCAGACAGGGCCAGTTTTTGTTTCCATGTTCAAGCCCTTAGGAATACTCATATCAGTGGTTTTAGGTGTTCTCTTCCTCGGAGACGCATTCTATCTTGGAAGTCTGGTTGGTGCTATTGTGATTGTTGTCGGGTTTTATTCTGTATTATGGGGGAAAGCCGAAGACACTAAAGATGGTGGAGTGAGAATGATAGGTTACCAGAAAGTGGGAGATGAGCTCCTTTTGGAGGAAAACAGCCATGAAGACACACAAGGGCCTTAG 1113 0.4205 MGKLNLPFVGMIMAEFAQVGLIILSKKAMAQGMTNFIFIFYSNTIAALLLLPISLLVHRFERPPITFSILCEFFLLALLGQAFGYAGIYYGSATLSTSILNLVPGFTFVLAVLFRFIPFPSSCLYLFKLFPLSGSRMEQLDWRKFSSLAKSLGTIVSIAGAFIVTLYKGPALLLGVSSANSSPKLLLSVDSNWILAGLFLAADCVMTSAYIILQASILKKYPAELIVVFFYCFFVAIQSVVTCLVVERDISAWSLEPKLRLLAVLYSGVMGSAFQVGIISWCLHQTGPVFVSMFKPLGILISVVLGVLFLGDAFYLGSLVGAIVIVVGFYSVLWGKAEDTKDGGVRMIGYQKVGDELLLEENSHEDTQGP 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02411 370 PANTHER WAT1-RELATED PROTEIN 7 340 IPR030184 GO:0016020|GO:0022857
Vimu10g02411 370 Pfam EamA-like transporter family 198 333 IPR000620 GO:0016020
Vimu10g02411 370 SUPERFAMILY Multidrug resistance efflux transporter EmrE 254 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02411 Vimu-Chr10 35014761 35018405 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g02411 6 340 Nodulin-like Gene Family AT5G40240 41.449 2.66e-81 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02411 - - vun:114164332 598.201