Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02410 ATGGAGGCTAAGACTAAGATGTCTGAGGTGTTGCCGTTCATAATGATGGTGATTATGGAAGGTTGGACCATAGGACTCACCATTTTTGCAAAAACTGCAATAACTAATGGAATGAGCCCATTTGTGTTCATAGTTTATACAAATGCTTTGGCCACTATAATTCTGTTCCCTTGTTCCTTTTTATCACACCAAGAGGACAGAAAGCAGCGGCTAACTTTTACTTTCTCTTTGTTCATGCGATTCCTGTTCCTTGGCTTTATAGGGATAACCATGGCTCAGAGCTTTTTATTCCTGGGTCTAAGTTATAGTTCGCCTATACTTGTGTGCGCCATGGGACACTTGATTCCAACGTTTAACTTTCTTCTCTCTCTCATTCTCAGGAAGACAGAGCTGAATTTAAGAAGCACTGGTATCCAAGTCCAAGTAATTGGTATCTTGGTATCAATAATGGGAGCAGTGTTAGCAGAATTCTTCAAGGGATCACTTATAAGACCCTCTTCTCACCACCTTAAACAAACCAACCAACTTCTTGTCTTCTCCTCAACACCAGAGTTTTGGCTTCTTGGTGGCGCTTTTCTTGCTACAGCTTTTTTCTCACTTTCACTTTCCAACTTCATCCAAAAAGAAACCGTCCAGCAATATCCAGAACCAATGAAGGTGGTTTCTTATTCTAGCTTAATTGGAACGATTCTCAGTGCAGTAGTGTCGTGTATTGTTGAGAGGGACATAATTGCTTGGAAGATAAAACGTAACAAGGATCTTATTCTCATTCTTCTAACTGCACTAGTAGGAGGTGTGATTCGTCCAAATATTCAAGTATGGTTAACCAGAATGAAGGGTCCACTTTATGTATCACTTTTCAAGCCCTTTGGTATTGCATTCGCCACTACTTTTGGACTTTGCTTCTTTTCTAACAGCCTTCATTATGGAAGTGTGATAGGAGCAACTTTACTTGGAATGGGGTATTATACAGTGATATATGGACAAATCAAAGGAAACGAAGAAGAGACAAGCTGTGACCATAGCTCTGATTCTTTGGACAAGAAGATACCTCTTCTGCAAGAAAAGATGGAAGTGTAA 1080 0.4 MEAKTKMSEVLPFIMMVIMEGWTIGLTIFAKTAITNGMSPFVFIVYTNALATIILFPCSFLSHQEDRKQRLTFTFSLFMRFLFLGFIGITMAQSFLFLGLSYSSPILVCAMGHLIPTFNFLLSLILRKTELNLRSTGIQVQVIGILVSIMGAVLAEFFKGSLIRPSSHHLKQTNQLLVFSSTPEFWLLGGAFLATAFFSLSLSNFIQKETVQQYPEPMKVVSYSSLIGTILSAVVSCIVERDIIAWKIKRNKDLILILLTALVGGVIRPNIQVWLTRMKGPLYVSLFKPFGIAFATTFGLCFFSNSLHYGSVIGATLLGMGYYTVIYGQIKGNEEETSCDHSSDSLDKKIPLLQEKMEV 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02410 359 Pfam EamA-like transporter family 191 326 IPR000620 GO:0016020
Vimu10g02410 359 Pfam EamA-like transporter family 21 154 IPR000620 GO:0016020
Vimu10g02410 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 157 - -
Vimu10g02410 359 PANTHER WAT1-RELATED PROTEIN 11 335 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02410 Vimu-Chr10 35001561 35003837 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g02410 1 358 Nodulin-like Gene Family AT1G70260 49.731 6.82e-124 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02410 - - vum:124840741 683.33