Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02405 ATGGGAGCAGTGGTAGCTGAATTCTACAAGGGACCACTTGTAAGACCTTCTTCTCACCACCTTAGACAAACTAAGCAACTTCTTCTCTTCTCCTCAACACCAGAATTTTGGCTTCTTGGTGGCGCTTTGCTTGCTGCAGCTTTCTTCTCCCTTTCAATTTCTAACTTTATCCAGAAAGAAACTCTAGAACAATATCCAGAACCAATGAAGGTGGTTTCTTATTCTAGCTTAATTGGAACGATCCTCAGTGCAACAGTGTCGTGTATTGTTGAGTGGGACATAAATGCTTGGAAGATAAAACGCAACAAGGATCTTATTCTCATTCTTCTAACTTCACTGGTAGGAGGTGTGATTCGTCCAAATGTTCAAGTATGGTTAACTCGCACGAAGGGTCCACTTTATGTTCCACTTTTCAAACCCTTTGGTATTGCATTTGCCGCTACTTTTGCAGTTTGCTTCTTTTCTAACAGCCTTCATTATGGAAGTGTGATAGGAACAACCATACTTGGAATGGGGTATTATACAATAATGTATGGACAAGTCAAAGGAAATGAAGAAGAGACAAGCTGTGACGATAGCTCAGATTCCTTGGACAAGAAGATACCTCTTCTGCTAGAAAAGATGGAAGTGTAA 633 0.406 MGAVVAEFYKGPLVRPSSHHLRQTKQLLLFSSTPEFWLLGGALLAAAFFSLSISNFIQKETLEQYPEPMKVVSYSSLIGTILSATVSCIVEWDINAWKIKRNKDLILILLTSLVGGVIRPNVQVWLTRTKGPLYVPLFKPFGIAFAATFAVCFFSNSLHYGSVIGTTILGMGYYTIMYGQVKGNEEETSCDDSSDSLDKKIPLLLEKMEV 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02405 210 Pfam EamA-like transporter family 42 177 IPR000620 GO:0016020
Vimu10g02405 210 PANTHER WAT1-RELATED PROTEIN 2 186 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02405 Vimu-Chr10 34981460 34982431 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g02405 2 209 Nodulin-like Gene Family AT1G70260 45.045 5.57e-61 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02405 - - vum:124840741 360.147