Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02367 ATGGTGCCTCCGGGGCCACCCACTCCCATTGGTGGTGCCCAGTCTGTTTCACCCTCTCTTTTAAGATCAAATTCTGGAATGCTAGGAGCTCAAGGGGGTCCCATGCCGTCGCAGACATCTTTCCCTTCACTCGTGTCTCCGCGTACTCAGTTCAACAACATGAACATTCTAGGAAATATGTCCAATGTAACTTCCATACTGAATCAATCTTTCCCAAATGGAGCTCCAAATCCTGGGCTATCTGGTCCAGGAAGTAGCCAACGTGGAGCAATTGATACTGGGGCTGAAACAGATCCGCTCTCCACTGTTGGTAATGGAATGAGCTTCAATAATTCTTCTTCCACGTTTGTACAGTCAAATATAGTAAATGCTGCTTCCTCTGGTCAAGGTCAGGGTCAACAATTTTCAAACCCTTCTAGTAACCAGATGTTGCCTGATCAACAACATTCCCAACAGCTCGAACCTCAAAATTTCCAACACAGTCAGCAGTCAATGCAACAGTTCTCTGGTCCTCTAAATACACAGCAGCTGCCTCCGCAGCAGCATTTTCAATCAATTCGAGGAGGTATAGGTGGCATGGGACCCGTAAAGCTAGAGCCCCAGGTAAACAACGATCAACTTGCACAACAGCAACAGCCGTTGCAATCTTTAAGGAGCCTTTCTTCAGTTAAATTGGAGCCACAACAAATGCAGACAATGAGAACATTGGGACCTGTTAAAATGGAGCCTCAGCACTCTGATCAACCATTATTTTTGCAGCAACAACAGCAGCAGCAACAACAACAGCAATTCCTCCACATGTCAAGTCAATCATCCCAGGCTACTGCTGCCCAGATCAATCTTTTGCGCCAGCACAGGCTTTTACAGTTACAACAACAACACCAGCAGCAGCAACTCTTGAAGGCAATGCCTCAGCAACGGTCCCAGCTACCACAGCAATTTCAACAGCAGAACATGCTAATGAGATCTGTGAAACCAGCTTATGAACCCGGGATGTGTGCTAGGCGGCTGACACATTACATGTATCAGCAACAACATAGACCTGAAGATAACAATATTGAGTTCTGGAGAAAGTTTGTTGCTGAGTATTTTGCTCCTAATGCCAAGAAGAAATGGTGTGTTTCTATGTATGGAAGTGGAAGACAAACAACTGGAGTTTTCCCTCAGGATGTATGGCACTGTGAAATATGTAATCGCAAGCCTGGACGTGGTTTTGAAGCAACTGTTGAGGTTCTTCCCCGGCTTTTCAAGATAAAGTATGAAAGTGGAACTTTGGAAGAACTACTTTATGTTGACATGCCTCGTGAATATCATAATTCCTCTGGTCAGATTGTACTAGATTATGCTAAAGCAATACAAGAAAGTGTTTTTGAGCAACTTCGTGTTGTTCGTGATGGTCAACTTCGAATAGTTTTCTCTCCAGACCTGAAGATTTGTTCTTGGGAATTTTGTGCTCGGCGCCATGAGGAGCTCATACCCAGGAGATTGTTAATACCACAGGTTAGCCAGCTTGGAGCAGTTGCACAAAAGTACCAGGCTTTTACTCAAAATGCAACACCAAATATATCTGTTCAAGAATTACAAAACAACTGCAATATTTTTGTCAGGATTTTGATTAAAATCTTGAATTTGCTTGATTTGGAAATCTTGCTTCCTGTTAACAAGCTGGATTTGAGTAAGATCATGAAGTGCTTCGCTGCTGCCTTCACTGTTCTCAGATCTCAATTCATCATTTTCTGCAACCTCAACAATGGGATGAGCGATATGTTTGTTGCATCAGCCCGTCAGTTGGCTAAAGCCTTAGAAGTACCATTGGTTAATGATCTAGGATACACAAAGAGATATGTGCGCTGCCTACAGTGCGGTGGTGACTGTGTGGTGATATCAGAAGTTGTAAATAGTATGAAAGACTTGATAGATTACAGCAGGGAAACTGAGACTGGACCTATGGATAGCTTGGCAAAATTCCCTCGGAGAACAAATGGTTCTTCTGGACCTCGTGGTCAAGCACAACAGCATGAAGAACAATTACAGCAGCAGCAGCAACAGCAACAAATGTTGGCCCATAATTCAAATGGTGATCAAAACTCAGTACAAGCTGCTGCCATGCAAATTGCTTCTAGCAATGGTATGGTCAGTGTGAATAACAATGTCAACTCAGCATCCACATCAACCACCACAAGTACTATCGTTGGACTTCTCCACCAGAATTCAATGAATTCTAGACAACAAAATTCAATGAACAATGCAAGTAGTCCATATGGAGGTAGTTCCGTTCAGATTCCATCCCCAGGTTCCTCCAATACAGTGCCACAGGTCCAGCCAAACTCATCCCCTTTTCAATCACCAACGCCATCTTCTAACAACCCCCCACAAACATCTCACCCTACTTTAACATCGGGCAATCACATGAGTACAACTAACTCAGCAGCTAATATTTCCATGCAACAGCAGCAGCCATCTATTTCTGGTGATCCTGACCCTAGTGATACTCAAAGCTCAGTCCAGAAAATCATACATGAAATGATGATGTCCTCTCAGATTAATGGCACAGGAGGAATGATCGGTGTTGGTTCTCTTGGAAATGATGTGAAAAATGTAAATGGTATTCTGCCAGTGAGTGTCAATACAGGGCTCAATGGTGGCAATGGCTTGATGGGTAATGGGTCAATGAACAGTAATTCAGGCGTTGGGGTTGGTAATTACGGCACAATGGGTCTTGGTCAATCCGCTATGCCTAATGGAATGAGAGCTGCTGTGGTGAATAATTCAATCATGAATGGAAGGGGAGGAATGGCATCTCTTGCTCGGGATCAAGCTATGAATCATCAACAGGATTTGTCAAACCAACTACTTAGTGGGCTAGGGGCAGTAAATGGTTTTAATAATCTTCAATTTGATTGGAAACCTTCTCCTTGA 2919 0.4358 MVPPGPPTPIGGAQSVSPSLLRSNSGMLGAQGGPMPSQTSFPSLVSPRTQFNNMNILGNMSNVTSILNQSFPNGAPNPGLSGPGSSQRGAIDTGAETDPLSTVGNGMSFNNSSSTFVQSNIVNAASSGQGQGQQFSNPSSNQMLPDQQHSQQLEPQNFQHSQQSMQQFSGPLNTQQLPPQQHFQSIRGGIGGMGPVKLEPQVNNDQLAQQQQPLQSLRSLSSVKLEPQQMQTMRTLGPVKMEPQHSDQPLFLQQQQQQQQQQQFLHMSSQSSQATAAQINLLRQHRLLQLQQQHQQQQLLKAMPQQRSQLPQQFQQQNMLMRSVKPAYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAVAQKYQAFTQNATPNISVQELQNNCNIFVRILIKILNLLDLEILLPVNKLDLSKIMKCFAAAFTVLRSQFIIFCNLNNGMSDMFVASARQLAKALEVPLVNDLGYTKRYVRCLQCGGDCVVISEVVNSMKDLIDYSRETETGPMDSLAKFPRRTNGSSGPRGQAQQHEEQLQQQQQQQQMLAHNSNGDQNSVQAAAMQIASSNGMVSVNNNVNSASTSTTTSTIVGLLHQNSMNSRQQNSMNNASSPYGGSSVQIPSPGSSNTVPQVQPNSSPFQSPTPSSNNPPQTSHPTLTSGNHMSTTNSAANISMQQQQPSISGDPDPSDTQSSVQKIIHEMMMSSQINGTGGMIGVGSLGNDVKNVNGILPVSVNTGLNGGNGLMGNGSMNSNSGVGVGNYGTMGLGQSAMPNGMRAAVVNNSIMNGRGGMASLARDQAMNHQQDLSNQLLSGLGAVNGFNNLQFDWKPSP 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02367 972 PANTHER LIM DOMAIN-BINDING PROTEIN 208 961 IPR029005 -
Vimu10g02367 972 MobiDBLite consensus disorder prediction 657 697 - -
Vimu10g02367 972 Coils Coil 670 690 - -
Vimu10g02367 972 MobiDBLite consensus disorder prediction 68 107 - -
Vimu10g02367 972 MobiDBLite consensus disorder prediction 647 697 - -
Vimu10g02367 972 MobiDBLite consensus disorder prediction 126 178 - -
Vimu10g02367 972 Pfam LIM-domain binding protein 336 653 IPR029005 -
Vimu10g02367 972 MobiDBLite consensus disorder prediction 12 46 - -
Vimu10g02367 972 MobiDBLite consensus disorder prediction 741 783 - -
Vimu10g02367 972 MobiDBLite consensus disorder prediction 741 834 - -
Vimu10g02367 972 MobiDBLite consensus disorder prediction 1 46 - -
Vimu10g02367 972 MobiDBLite consensus disorder prediction 791 834 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02367 Vimu-Chr10 34503790 34512050 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g02367 1 968 C2H2 Transcription Factor Family AT1G43850 52.663 0.0 666
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02367 - - gmx:100799771 1366.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02367 10 34503790 34512050 Vimu10g02367 10 34503790 34512050 ECH