Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02362 ATGTCTCAGGGAAGAGACAGTGCAAAATCTTTGGTTTTGGTCTCTGTGATTTGTCTACTGTGCCTGTTTGTTCTTTTGAAAGGTGCTAATGCAGCAACTTACACTGTTGGAGGGCCTTCAGGATGGAGCTTCAACACTGATACTTGGCCCAATGGAAAAAGGTTCAGAGCTGGTGATATCTTAGTCTTCAAGTATGACTCAACGAGCCACAATGTGGTTGCTGTGGACAAGAGTGGATACAGCACCTGCAGAAGTGCAGCAGGTGCAAGAGTGTTCCGTTCAGGGAACGATCAGATCAAGCTGGCAAAAGGACAGAACTACTTCATATGCAACTATCCTGGTCACTGTGAATCTGGGATGAAGATTTCCATCAATGCAGTGTGA 384 0.4557 MSQGRDSAKSLVLVSVICLLCLFVLLKGANAATYTVGGPSGWSFNTDTWPNGKRFRAGDILVFKYDSTSHNVVAVDKSGYSTCRSAAGARVFRSGNDQIKLAKGQNYFICNYPGHCESGMKISINAV 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02362 127 PANTHER BLUE COPPER PROTEIN 29 125 IPR039391 GO:0009055
Vimu10g02362 127 ProSitePatterns Type-1 copper (blue) proteins signature. 104 120 IPR028871 -
Vimu10g02362 127 ProSiteProfiles Phytocyanin domain profile. 32 127 IPR003245 GO:0009055
Vimu10g02362 127 FunFam basic blue protein-like 32 126 - -
Vimu10g02362 127 CDD Plantacyanin 32 126 IPR041844 -
Vimu10g02362 127 SUPERFAMILY Cupredoxins 32 126 IPR008972 -
Vimu10g02362 127 Pfam Plastocyanin-like domain 43 120 IPR003245 GO:0009055
Vimu10g02362 127 Gene3D - 32 127 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02362 Vimu-Chr10 34425577 34426120 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g02362 12 127 Phytocyanin Superfamily AT1G17800 42.017 2.42e-29 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02362 - - gmx:100788635 201.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02362 10 34425577 34426120 Vimu10g02362 10 34425577 34426120 ECH