Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02357 ATGGAGAACTGTGCAGAGAATATTACCATGAATGGTGAAAGCAATGACGAATTTATTAACGTAGTTGATAGTGTGTCTGACTTGGTTCCTACGGTCAACATGTGTTTCGACAGTATGGAAGATGCAAAGAAATATTATTCAGATTATGGAAAAAGAATTGGATTTGGTGTTCGTACAAGAACTTCAAAAAAGGACAACAATAACGAATTGTATTATTTGAGATTGGTATGTTCAAGGGAAGGTAGATATGTCTCTAACATTCGTCCTGAAGTAAAAACCATTCCTAGTCAAACAAAGCAATGCCCTGCGGGGATAACATTTGCCAAAAAAGATGACAAATGGGTTGTGAGGACTGTTATGGTAGATCACAGTCATGATCTTTGTCCACAAACTTCCAATCTCATTCGTGCCAACAGAAAATTGGAC 426 0.3732 MENCAENITMNGESNDEFINVVDSVSDLVPTVNMCFDSMEDAKKYYSDYGKRIGFGVRTRTSKKDNNNELYYLRLVCSREGRYVSNIRPEVKTIPSQTKQCPAGITFAKKDDKWVVRTVMVDHSHDLCPQTSNLIRANRKLD 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02357 142 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 8 140 - -
Vimu10g02357 142 Pfam FAR1 DNA-binding domain 44 128 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02357 Vimu-Chr10 34357271 34358133 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vimu10g02357 FAR1 1.2e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02357 - - vra:106766675 228.024