Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02320 ATGAAACACATCCTGCTTCTTCCTAATTCCTTAGGTGATAAGAAAATGCAATTGTATCATCATCCATTTGATTTGGACAGCCAGAAGGTGAGACTTGCGTTGGAAGAGAAAAGCATTGATTACACATCACACCATGTCAATCCTGTAACTGGCAAGAACTTGGATTCTTCATTCTTCAAGATGAATCCTGGTGGAAGACTCCCAGTTTTCCAAAATGGCTCTCACATTCTTTACAAGACTATTGATATAATCCAGTACATAGAAAGAATTGCCGTGTTCTCCTCTGGGTCTGAAAATATCAGTAGCAGTAACAAAGAAGTGATTGAATGGATGCAGAAGGTACAAGAGTGGAATCCAAAGTATTTTTCCCTTTCCCATGTACCGGAGAAATACAGAATATATGTTTCTAAGTTCTTAAGAAGAGTGGTGATTGCTCGAATGTCCGAGTCACCAGAACTAGCAGGTGCTTACCATAAGAAGTTAAAAGAAGCATATCAGACTGAAGAGAGAGTGAAAGATTCAGATGTGTTGATAAGGAGCAAGGAGCATTTAATTAGGCTGCTTGATGAAGTAGAGAAGCAGCTGAGTGAAACGCCGTATTTAGCAGGTCAAGAGTTTACTATGGCTGATGTGATGCTCATTCCAGTGTTGTCTCGTTTAGTGCTCTTGGATTTAGAGAAAGAGTACATAACTGGGAGGCCAAACATTGCTGAGTATTGGGTTTTGATTCAGCAGAGGCCTAGTTATAGGAAAGTGATTGGTAGGTATTTTGATGGTTGGAAAAAGCATAAGACATTGTTAAAAACTTGGTGCTTTGTTCGCGTTAGAAGTTTGCTGAAGAGATACTGA 849 0.3958 MKHILLLPNSLGDKKMQLYHHPFDLDSQKVRLALEEKSIDYTSHHVNPVTGKNLDSSFFKMNPGGRLPVFQNGSHILYKTIDIIQYIERIAVFSSGSENISSSNKEVIEWMQKVQEWNPKYFSLSHVPEKYRIYVSKFLRRVVIARMSESPELAGAYHKKLKEAYQTEERVKDSDVLIRSKEHLIRLLDEVEKQLSETPYLAGQEFTMADVMLIPVLSRLVLLDLEKEYITGRPNIAEYWVLIQQRPSYRKVIGRYFDGWKKHKTLLKTWCFVRVRSLLKRY 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02320 282 CDD GST_C_family 163 240 - -
Vimu10g02320 282 Pfam Glutathione S-transferase, N-terminal domain 15 89 IPR004045 -
Vimu10g02320 282 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 14 95 IPR004045 -
Vimu10g02320 282 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 128 267 IPR010987 -
Vimu10g02320 282 SFLD Glutathione Transferase (cytosolic) 16 240 IPR040079 -
Vimu10g02320 282 Gene3D Glutaredoxin 10 90 - -
Vimu10g02320 282 PANTHER GLUTATHIONE S-TRANSFERASE TCHQD 16 282 IPR044617 GO:0004364
Vimu10g02320 282 SUPERFAMILY GST C-terminal domain-like 168 254 IPR036282 -
Vimu10g02320 282 CDD GST_N_family 16 88 - -
Vimu10g02320 282 Pfam Glutathione S-transferase, C-terminal domain 180 239 - -
Vimu10g02320 282 SUPERFAMILY Thioredoxin-like 7 89 IPR036249 -
Vimu10g02320 282 Gene3D - 135 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02320 Vimu-Chr10 33862350 33865374 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g02320 16 282 Glutathione S-transferase Gene Family AT1G77290 67.416 4.38e-141 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02320 K22077 - gmx:100792543 504.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02320 10 33862350 33865374 Vimu10g02320 10 33862350 33865374 ECH
Vimu1g02361 1 34143235 34144411 Vimu10g02320 10 33862350 33865374 PCT