Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02269 ATGTCGGACGAGGATTCACAGACACAGAAGAAGGTGTTTGACGCGGAAACGGCGTCGTCGCTGGTGAAGGAGTTGAGGAAGAACTTTGGTTCGGGAAAGACGCGGAGTTATGAATGGAGAGTGTCGCAGGTGAAGGCTCTCTTGAAAGCGATGACTGATAACGAAGAAGAAATCGTTGATGCTCTTCGTTCAGACCTAGCGAAGCCTTCGCTCGAAACCGTCGTGTACGAGATTGGAGTGATTAAAAGCTCATGTGAAGGGATACTGAAGGAATTGAAGCATTGGATGACGCCAGAAAAGGTGAAAACATCAATCAGAACTTTTCCTTCTTCAGCTGAAATAGTACCTGAACCGCTGGGTGTTGTGTTAGTCATCTCTCCATGGAACTATCCAATGTTGTTGTCCCTTGATCCAGTCCTCGGAGCTATAGCAGCTGGTAATGCTGTGGTTCTAAAGCCATCAGAAATTGCTCCAGCCACATCATCACTACTAGAAAAATTGATAGAGAAGTATATGGATCAATCGATTGTACGAGTTGTCCAGGGGGCAGTCGATGAAACAACTGCACTATTGCAGCAAAAGTGGGACAAAATTTTCTACACAGGTAATGGAAAAGTTGGAAGAATAGTGATGACTGCTGCTGCAAAACACCTTACACCAGTTTTGCTGGAGCTTGGAGGAAAATCTCCCGTTGTCGTTGATTCAAATATCAACTTGAAGGTAACAGCAAGACGAATAATTTCTGGCAAGTGGGGATTGAACAATGGACAATCTTGCATTTCTCCCGATTATGTTATAACAACAAAAGACTATGCTCCTAAGTTGGTGGATGCCCTAAAGACTGAATTGCAGGAGTGTTACGGTAAGAATCCGTTGGAATCAGAAGATTTGTCACGAATTGTGAGTCACAACCACTTTGCTCGTTTGTCAAAGCTCTTGAATGATGATAAGGTTTCTGGGAAGATTGTTTATGGAGGTGAAAAAGATGAAAATAAACTAAGGATTGCTCCCACTATTCTATTGGATGTTCCGCGAGATTCTCTGATAATGGGTGAGGAGATATTCGGTCCATTGCTTCCCATCATCACGGTCAATGAACTTGAAGAAAGTCTAGATGTAATCAACTCAGGAGACAAGGCCCTTGCTGCGTATATATTTACAACTGACAAGAAGTTCAAGGAGGAGTTCGTAAAGAATGTTTCCGCTGGGGGTTTGCTTGTCAATGACACTACCCTACATGTTGTGGTTGATACTTTGCCATTTGGGGGTGTTGGAGAGAGTGGAATGGGTGCATACCATGGCAAGTTCTCCTTTGATGCTTTTACACACAAAAAGGCTGTTCTTTATCGCAGTTTTGCGGGTGATTCATCGTCAAGGTACCCACCATACACGGATACAAAGCAAAGATTGATGAAGGCTCTCATCGCTGGTAGCTTCCTTGGCATACTTCGTGCTCTTTTCGGATGGTCCTAA 1473 0.4379 MSDEDSQTQKKVFDAETASSLVKELRKNFGSGKTRSYEWRVSQVKALLKAMTDNEEEIVDALRSDLAKPSLETVVYEIGVIKSSCEGILKELKHWMTPEKVKTSIRTFPSSAEIVPEPLGVVLVISPWNYPMLLSLDPVLGAIAAGNAVVLKPSEIAPATSSLLEKLIEKYMDQSIVRVVQGAVDETTALLQQKWDKIFYTGNGKVGRIVMTAAAKHLTPVLLELGGKSPVVVDSNINLKVTARRIISGKWGLNNGQSCISPDYVITTKDYAPKLVDALKTELQECYGKNPLESEDLSRIVSHNHFARLSKLLNDDKVSGKIVYGGEKDENKLRIAPTILLDVPRDSLIMGEEIFGPLLPIITVNELEESLDVINSGDKALAAYIFTTDKKFKEEFVKNVSAGGLLVNDTTLHVVVDTLPFGGVGESGMGAYHGKFSFDAFTHKKAVLYRSFAGDSSSRYPPYTDTKQRLMKALIAGSFLGILRALFGWS 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02269 490 PIRSF ALDH 3 484 IPR012394 GO:0006081
Vimu10g02269 490 FunFam Aldehyde dehydrogenase 227 427 - -
Vimu10g02269 490 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 223 230 IPR029510 GO:0016491
Vimu10g02269 490 SUPERFAMILY ALDH-like 21 453 IPR016161 GO:0016491
Vimu10g02269 490 FunFam Aldehyde dehydrogenase 26 230 - -
Vimu10g02269 490 Pfam Aldehyde dehydrogenase family 13 447 IPR015590 GO:0016491
Vimu10g02269 490 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 26 445 IPR016162 GO:0016491
Vimu10g02269 490 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 227 427 IPR016163 GO:0016620
Vimu10g02269 490 PANTHER ALDEHYDE DEHYDROGENASE 17 480 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02269 Vimu-Chr10 33145739 33150245 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g02269 78 488 Aldehyde Dehydrogenase Gene Family AT1G44170 69.830 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02269 K00128 - gmx:100783726 849.351