Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02223 ATGGCAGTTCACAGGAAGTGCTATGGTGTGCATGAGGGTGTGGATGAGGCTTGGCTGTGCTCCTGGTGCAAACAAATGGGTGATGTTGATGAATCAGTGAATCCTTGTGTTCTTTGTCCAAAGAAGGGTGGTGCATTAAAACCAGTTTATAGCAGTGTGAAAGGTGCTGGCTCAGCTGCATTTGTGCACTTATTCTGCTCTCTGTGGATGCCTGAGGTTTATATAGATGATATGGAGAAGATGGAACCTGAAGCTTATATGGCACCTGAGGTCCGACACAAAATAGTGAATTGGCTAAAAGGCCATGTATATTCCGGTGCATTTCAGAAGGGTTTAAAGGTCAAATTCAAACCAGCCAATGCATCCAAAATTGATAGTGGAGCCACAGATGGCTCTGATACTTTACCAATATCAGACTCGGGTTTGCTGGATCCTGTTGCTGTTAAGTCGGTTCCACCAAGGAGGAGAACAACCAATAACATTAGGATTCTGAAGGATAATAAAGTGATATGTTCATCTGATGGGGTTACAAGTGAGAATGGGATGCCGGTACTCATGTGCAGAGTAGGTCAGTCCAACTGCGAGAATCCAACAAGTTCCAATGAAGCATCCATCCCCAATGCAACAGAAACGGTAATTTTACTTTTATAA 651 0.4363 MAVHRKCYGVHEGVDEAWLCSWCKQMGDVDESVNPCVLCPKKGGALKPVYSSVKGAGSAAFVHLFCSLWMPEVYIDDMEKMEPEAYMAPEVRHKIVNWLKGHVYSGAFQKGLKVKFKPANASKIDSGATDGSDTLPISDSGLLDPVAVKSVPPRRRTTNNIRILKDNKVICSSDGVTSENGMPVLMCRVGQSNCENPTSSNEASIPNATETVILLL 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02223 216 Pfam PHD-zinc-finger like domain 35 85 - -
Vimu10g02223 216 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 29 100 IPR013083 -
Vimu10g02223 216 PANTHER PHD FINGER PROTEINS 1 83 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g02223 1 82 C2H2 Transcription Factor Family AT3G14740 34.091 2.42e-07 48.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02223 10 32590982 32604195 Vimu10g02223 10 32590982 32604195 ECH