Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02209 ATGAGTTTTGGCGATGACACACTAGTTGGGTATTGGCCAATTGGGCCAAATTTGTACAAGGGAGTTCATATGGGTAAGAGGGTTGGGATTGAGAAGTTGAAAGGGTGTGATAAAGGGAATTCTTACGAGTTTGAGCTCCACAAGGATCTGCTGGAACTCATGACTTGTGGTCATAGGAACATTCTACAGTTCTGCGGTATTTGCGTGGATGATAATAATGGGTTGTGTGTGGTGACCAAGTTCATGAAAGGTGGATCTGTTCATGACCATTCTTACATAAATGTTGAGAGGAAAAAACCCCTTCTACTGCCTCGGTTCAACTCTAAACCGAGACATAAGACCCTCCTCTACTGCCTCGGCAAAAGCATACACATTTTTGTCTCGGTTTTTCAGAACCCAGGCATAAAGTGTGCAGTACAGGAACCAAACGGCATTTGCAGGCGCGGAGGGAATTGCAGAGGGGATTTGGCAGGGATACGTTTGGATTTGCAGAGGCAGCAGCAAAGTATCAGGGTACAAGAAAAAAAGAGGGGACACAGGGGGTTTCTTCTAGAGAACAACCCTCCTGCTGCATCGAGAACTAAGGGAGCTGCGGGAGCAACGTTTGGAACTGCGCCGAGGGAGGAAAAGGAAACTGATCGGATACGCAAGGTTGGCTGCCTTACACTTCATGTTTTTGTCCTTGAACGTATTACTGGTGCATTGCTGCATACGACTGTTATCAAATATTTTCCTGCTATGTTGTGA 747 0.4605 MSFGDDTLVGYWPIGPNLYKGVHMGKRVGIEKLKGCDKGNSYEFELHKDLLELMTCGHRNILQFCGICVDDNNGLCVVTKFMKGGSVHDHSYINVERKKPLLLPRFNSKPRHKTLLYCLGKSIHIFVSVFQNPGIKCAVQEPNGICRRGGNCRGDLAGIRLDLQRQQQSIRVQEKKRGHRGFLLENNPPAASRTKGAAGATFGTAPREEKETDRIRKVGCLTLHVFVLERITGALLHTTVIKYFPAML 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02209 248 MobiDBLite consensus disorder prediction 186 210 - -
Vimu10g02209 248 SUPERFAMILY Protein kinase-like (PK-like) 19 92 IPR011009 -
Vimu10g02209 248 Gene3D Phosphorylase Kinase; domain 1 15 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02209 Vimu-Chr10 32424435 32425949 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g02209 17 90 MAP Kinase Kinase Kinase AT4G38470 36.486 2.91e-09 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Vimu10g02209 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02209 - - gmx:100801110 157.918