Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02204 ATGGTGGTAGACCCGGTTCTAGGCTTCACTAGAGATCCTTCTCTCAGGAGTAGCATTTGTTCTTGCCCCGACTGTGGCGAGATCATGAAAGCTGAAAGCTTGGAGCATCACCAGGCAGTCAAACATGCAGTTTCTGAACTGGGTCCAGAAGACACCAGCAAGAACATAGTTGAAATAATATTCCACTCCAGCTGGCTGAAGAAGCAATCTCCAGTGTGCAAAATAGACCGCATCCTCAAGGTTCACAACACCCAGAAAACCATTACCAGATTCGAAGAATATAGAGACTCCATAAAAGCAAAGGCAACGAAACTCCCCAAGAAACACCCACGTTGCATAGCAGATGGCAACGAGCTACTCAGGTTTCACTGCACCTCCTTTGCGTGTTCTCTAGGCCTAAACGGGTCCTCCAACTTGTGCAACACCGTTCCACAGTGCAACGTTTGCAGCATAATCAAGCACGGGTTCAAGGTTACAGGAGGAAGCGGTATCTTGACAACGGCAACGAGTGGGAAGGCTCACGACAAGGCTTGTGTGGATGAGAGTGAAGAGAAGAGAGCAATGCTGGTTTGTCGGGTTATAGCAGGAAGGGTGAAGAAGAATGCAGAAGGAGGCATGGAGGAGTATGATTCGGTTGCAGGGGCTGTTGGGGCTTATTCGAATTTGGATGAGTTGGTTGTGTTCAACCCAAGAGCCATTTTGCCTTGCTTTGTTGTAATCTATAGTGGCTTTTGA 735 0.4803 MVVDPVLGFTRDPSLRSSICSCPDCGEIMKAESLEHHQAVKHAVSELGPEDTSKNIVEIIFHSSWLKKQSPVCKIDRILKVHNTQKTITRFEEYRDSIKAKATKLPKKHPRCIADGNELLRFHCTSFACSLGLNGSSNLCNTVPQCNVCSIIKHGFKVTGGSGILTTATSGKAHDKACVDESEEKRAMLVCRVIAGRVKKNAEGGMEEYDSVAGAVGAYSNLDELVVFNPRAILPCFVVIYSGF 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02204 244 SUPERFAMILY ADP-ribosylation 44 243 - -
Vimu10g02204 244 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 16 241 - -
Vimu10g02204 244 Gene3D - 42 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02204 Vimu-Chr10 32366777 32367890 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g02204 1 241 C2H2 Transcription Factor Family AT1G75710 54.182 1.06e-91 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02204 - - gmx:100817333 475.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02204 10 32366777 32367890 Vimu10g02204 10 32366777 32367890 ECH