Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02181 ATGGCATTCTCCATTGCCTTCTTGCCATCATTGACGACCCTGATTACGACTTCACCATTCATGACTTCTGCAACCATGTCCTTCTCGCTCTTCATACCATTGTTCAAAACGGACACCTGCCTATTATCGTGGATGGCTCCAACACTTTACCTCACAGCCTTGCTTGAGGATCCTGACGTTGCTTTTCGTTCCAAATATGATTGTTGTTTCATCTGGGTCGATGTGTCATTACTAGTGTTGTTTCCGTATCTGGACAAAAGGGTGGACGAAATGGTTGATGCAGGAGTTATGGATGAGATTCGAGAAGTTTTTGTTGTTGGAGCATATTGTAGTCGTGGAATTAAAAGAGCCATTGAGCTTCCTGAGCTTGGAGAGTTTTCCTTCTCAAGAAACAAGTGTACACAATATTAA 411 0.4282 MAFSIAFLPSLTTLITTSPFMTSATMSFSLFIPLFKTDTCLLSWMAPTLYLTALLEDPDVAFRSKYDCCFIWVDVSLLVLFPYLDKRVDEMVDAGVMDEIREVFVVGAYCSRGIKRAIELPELGEFSFSRNKCTQY 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02181 136 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 49 126 IPR039657 -
Vimu10g02181 136 Pfam IPP transferase 63 125 - -
Vimu10g02181 136 Gene3D - 36 135 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02181 Vimu-Chr10 32064964 32065374 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g02181 64 126 C2H2 Transcription Factor Family AT2G27760 39.683 2.22e-11 58.2