Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02173 ATGGAGCACATGAAAATTAAGGAGGTAGCATGTCAAGCGAAAGTGATTGGCACCGTAGTAACATTTGGAGGAACCTTGCTTATGGCACTGTACAAAGGCCCCGTCCTTAGTTTCATGAAATCTTCGACCAGCCATGCTAGCCAAACTGAGAACGTGACCAACCCCACTGGCAACCATTGGGTAATAGGAACAGTGTTCCTCCTCATTGGTTGTGCAGGCTTTTCTGCATTTTACATATTACAGGCCATAACATTGAGAAAATACCCAGCAGAGATGTCGTTGGCCACTTGGGTTTGCTTTGTAGGAGCACTTCAAAGCTCTGTTGTTGCAATCTTCGCAGAACGCCACCACCCTCATGCTTGGTCCCTTGGTTGGGACACACGACTCTTTGCCCCTGCTTACGCGGGAATAGTTACATCAGGAGTTCAGTATTACATACAAGGCATGGTGATAAAATCCATGGGTCCAGTTATTGTGACTGCTTTCAATCCTCTGCGTATGATCATTGTTACAGGCTTGGCCTGCATCATCCTATCTGAGCAACTGTACCTTGGAAGTATAATTGGAGCAATAGTTGTTGTGCTGGGGCTTTATCTAGTAGTGTGGGGAAAAGCTAAAGAACGCAGAGGTCTGACGCCACCATCTCCTACAGAGGATAACTTTACCGAAGATCAACGACAGCTACCGGTCACAGCTCGAAGGAATGATAGTGATGACAACAAGGCTTAA 729 0.4636 MEHMKIKEVACQAKVIGTVVTFGGTLLMALYKGPVLSFMKSSTSHASQTENVTNPTGNHWVIGTVFLLIGCAGFSAFYILQAITLRKYPAEMSLATWVCFVGALQSSVVAIFAERHHPHAWSLGWDTRLFAPAYAGIVTSGVQYYIQGMVIKSMGPVIVTAFNPLRMIIVTGLACIILSEQLYLGSIIGAIVVVLGLYLVVWGKAKERRGLTPPSPTEDNFTEDQRQLPVTARRNDSDDNKA 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02173 242 PANTHER WAT1-RELATED PROTEIN 1 215 IPR030184 GO:0016020|GO:0022857
Vimu10g02173 242 Pfam EamA-like transporter family 62 201 IPR000620 GO:0016020
Vimu10g02173 242 SUPERFAMILY Multidrug resistance efflux transporter EmrE 98 206 - -
Vimu10g02173 242 MobiDBLite consensus disorder prediction 209 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02173 Vimu-Chr10 31907391 31908536 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g02173 1 231 Nodulin-like Gene Family AT2G39510 41.991 7.76e-65 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02173 - - gmx:100811984 422.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02173 10 31907391 31908536 Vimu10g02173 10 31907391 31908536 ECH
Vimu10g02173 10 31907391 31908536 Vimu7g03756 7 33010047 33011923 ECH
Vimu10g02173 10 31907391 31908536 Vimu1g02223 1 31931335 31934921 ECH