Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02172 ATGATTGTTGCAGATAAAGAGAAGCAGCCGTATCTGCTGTTATTGGCCGTTCAATTTGGCTCCGCCGGCATGTTCATTTTCGCCATGGATGCCATGAGAAAGGGCATGAGCCATTATGTCTTCACCGTCTACCGTAATCTTATCGCCTTTCTCACTCTCTCTCCCTTTGCATTTTTTCTTGAAAGGAAAGTTCGACCCAAGATGACTGTTGGTATATTTTCAGAGATTATGGCACTGGCTTTCTTCGAGATAATACTTGACCAGTGTTTCGCTCTTTTGGGCATGAAATTCACGTCAGCTTCTTTTCTATCTGCTGTCATGAACTCCGCACCCTCTGTTACTTTTGTCATGGCTGTTATTCTAAAGTAA 369 0.4309 MIVADKEKQPYLLLLAVQFGSAGMFIFAMDAMRKGMSHYVFTVYRNLIAFLTLSPFAFFLERKVRPKMTVGIFSEIMALAFFEIILDQCFALLGMKFTSASFLSAVMNSAPSVTFVMAVILK 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02172 122 Pfam EamA-like transporter family 10 121 IPR000620 GO:0016020
Vimu10g02172 122 PANTHER WAT1-RELATED PROTEIN 9 119 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02172 Vimu-Chr10 31891632 31892282 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g02172 9 122 Nodulin-like Gene Family AT4G08290 54.386 2.01e-40 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02172 - - gmx:100776215 201.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02172 10 31891632 31892282 Vimu10g02172 10 31891632 31892282 ECH