Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02171 ATGAAGGAGGCAACATGTAAAGCAAAAGTTATTGGAACAATAGTAAGTTTTGGAGGAACTTTGCTAATGGCACTGTACAAAGGCCCGGCACTTAGTGTTATGGGATCTTCAACCACCCAACCCCAGAACGTCAACAACAACACCGGTAACCACTGGATCATAGGGACAGCTTTCCTCCTTATTGGTTGTGCAGGCTTTTCTGCCTTTTACATATTACAAGTCATAACATTGAGAAAATACCCAGCAGAGATGTCCCTGGCTACTTGGGTTTGCTTTGTCGGTGCCCTTCAAAGTTCTATCGTGGCATTCTTCGCAGAACACCACCACCCTAATGCCTGGTCCATTGGTTGGGATACACGATTCTTTGCTCCTGCTTACGCGGGAATAGTTTCATCCGGAGTTCAGTATTACATACAAGGCGTGGTAATCAAATCCATGGGCCCAGTTATTGTCACTGCTTTTAATCCCCTTCGTATGATCATCATTACCACCTTGGCCTGCATCGTCCTCTCTGAGAAACTCTACCTTGGAAGTATTATTGGAGCAGTAGTTGTGGTTCTTGGACTGTATCTTGTTGTGTGGGGAAAATCTAAAGAATGCCAGCAAAGGATAATGCCACCATCCCCTGCAAATGATATCCCTCCAGAAGATCAACGTCAGCTACCTGTCACAGCTCCTAGGAATAATAGGAATAATGATAATAATGCTTAG 711 0.4444 MKEATCKAKVIGTIVSFGGTLLMALYKGPALSVMGSSTTQPQNVNNNTGNHWIIGTAFLLIGCAGFSAFYILQVITLRKYPAEMSLATWVCFVGALQSSIVAFFAEHHHPNAWSIGWDTRFFAPAYAGIVSSGVQYYIQGVVIKSMGPVIVTAFNPLRMIIITTLACIVLSEKLYLGSIIGAVVVVLGLYLVVWGKSKECQQRIMPPSPANDIPPEDQRQLPVTAPRNNRNNDNNA 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02171 236 MobiDBLite consensus disorder prediction 205 236 - -
Vimu10g02171 236 PANTHER WAT1-RELATED PROTEIN 2 205 IPR030184 GO:0016020|GO:0022857
Vimu10g02171 236 MobiDBLite consensus disorder prediction 222 236 - -
Vimu10g02171 236 Pfam EamA-like transporter family 54 193 IPR000620 GO:0016020
Vimu10g02171 236 SUPERFAMILY Multidrug resistance efflux transporter EmrE 90 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02171 Vimu-Chr10 31889748 31890768 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g02171 1 236 Nodulin-like Gene Family AT2G39510 40.408 2.76e-62 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02171 - - pvu:PHAVU_009G1240000 387.111