Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02170 TTGCAGAGAGTTATCAAGAAGAAAAAGATGGTTACGTGGTTGAGAAATGCAAGGCCCTATCTGATGTTACTTGCTGTTCAATTTGGTTCTGCCGGCATGTTCATATTTGCCATGGATGCTATAAAGAAGGGTATGAGCCATTACGTCTTCATTGTCTACCGTAACGCCATAGCCTCTGTAACTCTCGCTCCCTTCGCCTTTGTTCTTGAAAGGAAAGTTCGGCCGAAGATGACTGTCCGTATATTTTCAGAGATTATGGCACTGGCTTTCTTCGAGATAATACTGGACCAGTGTTTCGCTCTATTGGGCATGAAGTTCACGTCAGCTTCTTTCCTATCTGCTGTGATGAACTCCGCACCCTCTGTTACTTTTGTCATGGCTGTTATTCTGAGGTTGGAGCACATGAAGATGAAGGAGGTGGCATGTCAAGCCAAATTGATTGGAACAATAGTAACTTTTGGAGGCACCTTGCTAATGGCACTTTACAAAGGCCCTGTGATTAGTTTGATGAAATCTTCAACAACCCATGCTGCACAACCTCAGACTCTCAACAACCCCACCGCTAACCACTGGATCCTAGGAACATGTTTCCTCCTCATCGGTTGTGCAGGCTTCTCTGCGTTTTACATATTACAAACCATAACATTGAGAAAATACCCAACAGAGATGTCCCTGGCGACTTGGGTTTGCTTCGTAGGTGCACTTCAAAGCTCTGTTGTAGCAGCCATCGCAGAACGGCACCACCCTCATGCATGGGCCGTTGGTTGGGATACACGACTCTTTGCTCCAGCTTATGCAGGAGTAGTTACATCAGGAGTTCAGTATTACATACAAGGCATGGTGATAAAATCGATGGGCCCAGTTATTGTGACTGCTTTTAATCCCCTTCGTATGATCATCATTACCACCTTGGCCTGCATCATTCTATCTGAGCAACTCTACCTTGGAAGTGTTATTGGAGCTATAGTTGTGGTTCTTGGGCTATATCTAGTGGTGTGGGGAAAAGCTAAAGAATGCCAGCGAAGAATGCCACCATCCCCTGCAAAGGTTAACTTTCCAGAAGACCAACGACAGCTACCTGTTACAGCTCCTAATAATAAGGGTTAA 1107 0.4517 MQRVIKKKKMVTWLRNARPYLMLLAVQFGSAGMFIFAMDAIKKGMSHYVFIVYRNAIASVTLAPFAFVLERKVRPKMTVRIFSEIMALAFFEIILDQCFALLGMKFTSASFLSAVMNSAPSVTFVMAVILRLEHMKMKEVACQAKLIGTIVTFGGTLLMALYKGPVISLMKSSTTHAAQPQTLNNPTANHWILGTCFLLIGCAGFSAFYILQTITLRKYPTEMSLATWVCFVGALQSSVVAAIAERHHPHAWAVGWDTRLFAPAYAGVVTSGVQYYIQGMVIKSMGPVIVTAFNPLRMIIITTLACIILSEQLYLGSVIGAIVVVLGLYLVVWGKAKECQRRMPPSPAKVNFPEDQRQLPVTAPNNKG 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02170 368 MobiDBLite consensus disorder prediction 343 368 - -
Vimu10g02170 368 Pfam EamA-like transporter family 19 159 IPR000620 GO:0016020
Vimu10g02170 368 Pfam EamA-like transporter family 193 332 IPR000620 GO:0016020
Vimu10g02170 368 PANTHER WAT1-RELATED PROTEIN 19 343 IPR030184 GO:0016020|GO:0022857
Vimu10g02170 368 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 163 - -
Vimu10g02170 368 SUPERFAMILY Multidrug resistance efflux transporter EmrE 241 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02170 Vimu-Chr10 31877698 31881507 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g02170 1 338 Nodulin-like Gene Family AT2G37460 44.379 6.03e-106 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02170 - - gmx:102665912 633.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02170 10 31877698 31881507 Vimu10g02170 10 31877698 31881507 ECH