Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02166 ATGGTGGTGGTGAACCTGAGAAAATTTCACAGCCTAGCGAAGGTCATTGGAACGGTTATAACTGTTTCAGGAGCTATGGTTATGACTCTGTACAAAGGTCCTGCCTTCCAAATCATAAAGGGTGGAGGAGCCATCAGCAGCCACAGCAACTCTAGCAGTAGTACCACTGAACCCTCTGATCAACACTGGGTGGTTGGCACAGCCATGCTCATATCAAGTTGTGCCAGTTGGGCTGGTTTCTTCATTTTGCAAGGGGTGATTTGTTCTGGAATGGCGTACTATGTACAAGGGGTTGTGACCAGGGAACGTGGACCAGTGTTTGTGACATCTTTTAGCCCTTTATGTATGATAATCACCGCTGCATTGGGTTCTCTTGTTTTAGCCGAACAAGTTCATCTTGGAAGTATATTTGGGGCTATTCTGATCGTGTGCGGACTTTACACCGTGGTGTGGGGCAAAAGCAAAGACCGTGTGAACACAACAGAAACAGGGAAAGAAGCAAGGCAAGAATTGCCAATGAAGGACAGTACAAAATCAGCGTCGGACAACTTTTATGGGCTTGAGATCAATGTTTCAGATGAGGTGTTGAGGAAAGGTGTCCCACCAACAACCTTATCATGA 621 0.4622 MVVVNLRKFHSLAKVIGTVITVSGAMVMTLYKGPAFQIIKGGGAISSHSNSSSSTTEPSDQHWVVGTAMLISSCASWAGFFILQGVICSGMAYYVQGVVTRERGPVFVTSFSPLCMIITAALGSLVLAEQVHLGSIFGAILIVCGLYTVVWGKSKDRVNTTETGKEARQELPMKDSTKSASDNFYGLEINVSDEVLRKGVPPTTLS 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02166 206 MobiDBLite consensus disorder prediction 161 180 - -
Vimu10g02166 206 SUPERFAMILY Multidrug resistance efflux transporter EmrE 67 155 - -
Vimu10g02166 206 MobiDBLite consensus disorder prediction 161 175 - -
Vimu10g02166 206 PANTHER WAT1-RELATED PROTEIN 83 163 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02166 Vimu-Chr10 31836549 31839775 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g02166 4 190 Nodulin-like Gene Family AT4G08300 47.083 5.80e-64 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02166 - - gmx:100783910 258.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02166 10 31836549 31839775 Vimu10g02166 10 31836549 31839775 ECH