Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vimu10g02095 | ATGGAAAACGAATTATTAACTCGTGCCTCACTTGCCCCAACATCGGAGTTACTTTCTCGGACCATACATGCTGTATTTGACACTGTGAAAGCAGCGAATGAGGTTGTCATTCACAAGGAAAATTTTAAGAGATTCGCTATTCATTTGGAGAATGTTTCATTTATATTAAAGTCTTTGTCGAAGGAAGGCATACACAACGGCTGGAGCTTGCAAAAGGCTGTGGCTGGTCTCAACCGAGAGGTTGAAGTTGCTAAGCAGCTTTCTGTTGAGTGCAACAGTAGAAGTAAGGTTTATCTTTTAATCAATTCAAGAAAGATTGTTACCCGCTTGAATTGTTGTACCAAGGATATAGGTCGTGCCATAACTCTTATACCTTTGGCCTCTTTAAACATTAGCTCTGGTTTAAATCAACAGATAAGTGAATTGTGTCAGAAAATGTTAGATGCTGAGTATCAAACAGCTGCAACAGATGAGGAGATTTTGAAGAAAGTTGAGACAGCAATACAAGAGGGAAATGTTGATCGGTCCTATGCGACTCAGTTGCTAGCTGGCACTGCACGTGCCATTGGGGTCCCCGTGGAGCATGGTGCTTTGAAAAGAGAATTCGAAGATCTGAAAAATGAAATGGAAAATGCCAAGTCAAGGATGGACATGTCAGAAGCTCTACACATGGAGCAGATTATTGCAGTGCTTGGAAAGGCAGATTTTATAACTTCAGCACAAGAGAAGGAAAGTAAGTATTTTGAGAAGAGAAATTCCTTGGGAGAGAGACCATTGAGAGCTCTGCATTCCTTTTACTGCCCAATCTCTCATGAAATCATGGTGGACCCCGTGGAGACTTCCTCTGGGAAGACATTTGAGAGAAGTGAAATAGAGAAATGGTTTGCTGAAGGGAACAATCTCTGTCCCTTGACCAGGTTGCCTCTGGATACTAGAATCCTGAGGCCAAATAAAACTCTTAAAATGTCTATTCAAGAATGGAAGGATAGAAACACTATGATTACCATTTCTACCATCAAATCCGAACTTGAAACGAATGACGAAGAGGAATTGATTCGGTCCTTAGACAAATTACAGGACTTGTGCTTAGAAAGAGAGGTGCACCGGGAATGGTTACAAATTGAGAATTACATTACTGTTCTCATTGGACTTCTTAGTTCTAAAAATCGTGAAATAAGGAAGCGTGTTCTACTCATCCTGTCTATGCTTGTAATGGATAATGCGGAGAACAAGGAAGATATTGCTATAGTGGATAATGGACTGGGATTGATTGTTCGCTCACTTTCACGACAAGTTGAGGAGCGCAAGTTGGCATTGGAGTTGCTGTTGGAGCTATCTAAAAGTAAAACGTTGTGCAGTCTCATAGGAAACATTCAAGGAAGCATACTTCTGCTGGTAACAATGTTAAATAGTGATGATGTCGAAGCAGCCAAAAATGCACATGAGCTGCTGGAGAACCTCTCTTTCCTTGATCAGAATGTTATAGAGATGGCAAAGGCAAATTATCTTAAGCCTTTACTGCTGAAACTTTCTACAGGACCAGAAAATGTGAAAAGAGTCATGGCTGAAACTTTGTCAGAAATTACATTAATAGACCAGAATAAATTGTCTTTGGTCAAAGATGGGGCATTGCAACCTCTTCTTCAGCTGCTCTTAAATGATGATTTGGAAATCAAGAAGGTGTCTGTCAAAGCTTTACTACAGCTCTCAAGCATGCCAGAGAATTGCCTGCAGATGATTAAGGAAGGTGTTGCTCAACCACTGTTGGAACTGCTATACTGTCACAGTTTACAGTCACCTACTCTGCTTGAACAGGTTGTTGCCACAATAATGCATCTTGCGATGTCAACAACTCACCAACAAGCTGAAGCAGAACAGCTTTCATTCTTAGATTCCGATGAAGACGTGTACAAATTCTTCTCTCTAATTTCTTTGACTGACCATGAGATACAAAACAAGATTCTCAAAGCTTTGCAGGCGCTGAGCCAATCTTTCTATGGCTTCCGCATCAGAAAGAGGTTGAGACAGATATCGGCCGCTAAGTTATTGGTAAACTTATTGGAGACTAATACTCAAAAAGTTCGGGTCAATGCCTTGAAGCTTTTCTATTGCTTGACAGAAGACGATGATTATGGCAACATCTCACCACATATAACTGAAAGATTCATTGAAGTCTTGCTTGCCATCATTGAGGTTTCTGATGACGCAGAGGAGATGATTACTGTAATGGGTATCATCTCTAAACTTCCGCAGGAGTCTCAAATGACGCAATGGCTTCTAGATTCTGGGGCACTTAAAACTATTTTGACTTGTCTTACTGATCAACATAGCCATGCCTCAGACAAAATCATAGAGAATTCTGTTCAAGCTCTTTGTCGTTTCACTGTCTCGTCGAATCTGGAGTGGCAGAAGAGTGTGGCTTTAGAAGGCATAATCCCAGTACTGGTGCAACAGCTGCTTTCTGGAACACCCTTTACAAAACGAAATGCAGCCATTTCGATCAAACAGTTTTCGGAAAGTTCCTATCGCTTGAGCGAGCGGATAAAGAAGCCAGGTATTCTCAAATGCTGCTTTGTAGCCCGAGAAACTGGTTGCCCAGCACATTTAGGCACCTGCTCAATCGAGAATTCATTCTGCATTCTGCAAGCTAATGCCTTGGAGCCCCTTGTGCGCTTGCTTGGTGACACGGATGTTAGAACCTGCGAAGCTTCCTTAGATGCGATACTAACTTTGGTTGATAGTGAAGCACCGCAGAGTGGAAGTAAGGTACTTTCAAATTCAAATGCCATTGCACCGATGTTACAATTGTTGAGTGTTGAAGCTCCCAGGTTGCAGGAAAAAATTCTAATAGCTTTAGAACGAATTTTTCAACTAGATGAAGTGAGAAATAAGTACAAAGCTATGGCTACAATGGCCTTGGTAGGCATAACTCAAGGGAAAGATAGCCGTTTGAAAAGTCTTGCTGGTAGAGGCCTTGCTCAATTGGGTATACTTGATAAACAGTCTTCTTATTTTTAG | 3018 | 0.4132 | MENELLTRASLAPTSELLSRTIHAVFDTVKAANEVVIHKENFKRFAIHLENVSFILKSLSKEGIHNGWSLQKAVAGLNREVEVAKQLSVECNSRSKVYLLINSRKIVTRLNCCTKDIGRAITLIPLASLNISSGLNQQISELCQKMLDAEYQTAATDEEILKKVETAIQEGNVDRSYATQLLAGTARAIGVPVEHGALKREFEDLKNEMENAKSRMDMSEALHMEQIIAVLGKADFITSAQEKESKYFEKRNSLGERPLRALHSFYCPISHEIMVDPVETSSGKTFERSEIEKWFAEGNNLCPLTRLPLDTRILRPNKTLKMSIQEWKDRNTMITISTIKSELETNDEEELIRSLDKLQDLCLEREVHREWLQIENYITVLIGLLSSKNREIRKRVLLILSMLVMDNAENKEDIAIVDNGLGLIVRSLSRQVEERKLALELLLELSKSKTLCSLIGNIQGSILLLVTMLNSDDVEAAKNAHELLENLSFLDQNVIEMAKANYLKPLLLKLSTGPENVKRVMAETLSEITLIDQNKLSLVKDGALQPLLQLLLNDDLEIKKVSVKALLQLSSMPENCLQMIKEGVAQPLLELLYCHSLQSPTLLEQVVATIMHLAMSTTHQQAEAEQLSFLDSDEDVYKFFSLISLTDHEIQNKILKALQALSQSFYGFRIRKRLRQISAAKLLVNLLETNTQKVRVNALKLFYCLTEDDDYGNISPHITERFIEVLLAIIEVSDDAEEMITVMGIISKLPQESQMTQWLLDSGALKTILTCLTDQHSHASDKIIENSVQALCRFTVSSNLEWQKSVALEGIIPVLVQQLLSGTPFTKRNAAISIKQFSESSYRLSERIKKPGILKCCFVARETGCPAHLGTCSIENSFCILQANALEPLVRLLGDTDVRTCEASLDAILTLVDSEAPQSGSKVLSNSNAIAPMLQLLSVEAPRLQEKILIALERIFQLDEVRNKYKAMATMALVGITQGKDSRLKSLAGRGLAQLGILDKQSSYF | 1005 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vimu10g02095 | 1005 | SUPERFAMILY | ARM repeat | 533 | 855 | IPR016024 | - | |
| Vimu10g02095 | 1005 | Gene3D | - | 333 | 533 | IPR011989 | - | |
| Vimu10g02095 | 1005 | SUPERFAMILY | RING/U-box | 251 | 333 | - | - | |
| Vimu10g02095 | 1005 | Gene3D | - | 863 | 988 | IPR011989 | - | |
| Vimu10g02095 | 1005 | Pfam | Armadillo/beta-catenin-like repeat | 532 | 570 | IPR000225 | GO:0005515 | |
| Vimu10g02095 | 1005 | Coils | Coil | 195 | 222 | - | - | |
| Vimu10g02095 | 1005 | Gene3D | - | 636 | 860 | IPR011989 | - | |
| Vimu10g02095 | 1005 | SMART | Ubox_2 | 264 | 327 | IPR003613 | GO:0004842|GO:0016567 | |
| Vimu10g02095 | 1005 | SUPERFAMILY | ARM repeat | 335 | 624 | IPR016024 | - | |
| Vimu10g02095 | 1005 | CDD | RING-Ubox_PUB | 265 | 314 | IPR045210 | - |
Showing 1 to 10 of 24 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vimu10g02095 | - | - | gmx:100818273 | 1574.68 |
Showing 1 to 1 of 1 entries