Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu10g02007 | ATGGGTTCAACGGGGGAGACTCAGATCACTCCAAGCCATGTGTCTGATGAAGAGGCAAACCTGTTTGCGATGCAACTGGCGAGTGCCTCTGTCCTCCCAATGGTTCTGAAATCAGCCATCGAGCTTGATCTGCTGGAAATCATAGCCAAGGCTGGCCCTGGAGTTCATCTTTCTCCCTCTCACATTGCTTCTCAGCTCCCAACAAAAAACCCTGAGGCACCGGTCATGTTGGACCGCATCTTGCGTCTATTGGCTTCATACAACATCCTCACTTTCACCCTCCACACTCTCCCTGATGGTAAGGTTGAGAGGCTCTATGGCCTTGCTCCTGTTGCCAAGTACTTGGTCAAAAACGAAGATGGCGTCTCCTTGGCTGCTCTCAACCTCATGAACCAGGATAAAATCCTCATGGAAAGCTGGTACTACTTGAAAGATGCAGTTCTCGAAGGGGGGATTCCATTTAACAAGGCATATGGAATGACAGCCTTTGAATACCATGGAAAGGATCCAAGGTTTAACAAGGTTTTCAACAAGGGTATGGCCGATCACTCTACCATCACAATGAAGAAAATTCTCGAGACCTATACAGGCTTTGAGGGTATTAAATCTCTGGTTGATGTTGGTGGTGGAACTGGAGCTATAATAAATATGATAGTCTCAAAGTATTCCAATATCAAGGGTATTAATTTTGATTTACCCCATGTCATCGAAGATGCCCCATCTTATCCAGGAGTGAAGCATGTGGGTGGAGACATGTTTGTCAGTGTTCCAAAAGCCGACGCTATTTTTATGAAGTCTGATAATCGTGTTCTACTTGTTTATGCTAATGATTTTAATATCATTGATACCTCCAGTGGATTTGCCACGATTGGATTTTTGAAGAACTGCTACGATGCATTACCAGAAAACGGGAAGGTGATAGTGGCAGAATGCATTCTTCCAGTGGCTCCAGACTCTAGCTTGGCCACAAAGGGTGTGGTTCATATAGATGTGATAATGTTGGCTCATAATCCAGGTGGGAAAGAGAGAACAGAGAAAGAGTTTGAGGCTCTGGCCAAAGGATCTGGATTCCAAGGTTTCCGAGTTCTCTGCTCTGCTTTCAATACCTACATCATCGAGTTTCTCAAGAAGGTTTAA | 1137 | 0.4485 | MGSTGETQITPSHVSDEEANLFAMQLASASVLPMVLKSAIELDLLEIIAKAGPGVHLSPSHIASQLPTKNPEAPVMLDRILRLLASYNILTFTLHTLPDGKVERLYGLAPVAKYLVKNEDGVSLAALNLMNQDKILMESWYYLKDAVLEGGIPFNKAYGMTAFEYHGKDPRFNKVFNKGMADHSTITMKKILETYTGFEGIKSLVDVGGGTGAIINMIVSKYSNIKGINFDLPHVIEDAPSYPGVKHVGGDMFVSVPKADAIFMKSDNRVLLVYANDFNIIDTSSGFATIGFLKNCYDALPENGKVIVAECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTEKEFEALAKGSGFQGFRVLCSAFNTYIIEFLKKV | 378 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu10g02007 | 378 | Pfam | Dimerisation domain | 34 | 85 | IPR012967 | GO:0046983 | |
Vimu10g02007 | 378 | PANTHER | O-METHYLTRANSFERASE | 23 | 357 | IPR016461 | GO:0008168 | |
Vimu10g02007 | 378 | FunFam | Caffeic acid O-methyltransferase | 116 | 376 | - | - | |
Vimu10g02007 | 378 | Gene3D | - | 1 | 115 | IPR036388 | - | |
Vimu10g02007 | 378 | FunFam | Caffeic acid 3-O-methyltransferase | 3 | 115 | - | - | |
Vimu10g02007 | 378 | ProSiteProfiles | SAM-dependent O-methyltransferase class II-type profile. | 24 | 376 | IPR016461 | GO:0008168 | |
Vimu10g02007 | 378 | SUPERFAMILY | "Winged helix" DNA-binding domain | 15 | 119 | IPR036390 | - | |
Vimu10g02007 | 378 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 120 | 374 | IPR029063 | - | |
Vimu10g02007 | 378 | PIRSF | O-mtase | 1 | 377 | IPR016461 | GO:0008168 | |
Vimu10g02007 | 378 | Gene3D | Vaccinia Virus protein VP39 | 116 | 376 | IPR029063 | - | |
Vimu10g02007 | 378 | Pfam | O-methyltransferase domain | 140 | 358 | IPR001077 | GO:0008171 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu10g02007 | Vimu-Chr10 | 29385817 | 29387272 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu10g02007 | 1 | 378 | Monolignol Biosynthesis Gene Families | AT5G54160 | 72.222 | 0.0 | 558 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu10g02007 | K13066 | - | gmx:100780100 | 648.277 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vimu10g02007 | 10 | 29385817 | 29387272 | Vimu10g02007 | 10 | 29385817 | 29387272 | ECH |