Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01999 AAAAAAAACAATCTTAAAGAGAAAATGAGGTCAACAATGCTTAAATGCATAATAAGTATAGTGTCGGTCATATATTTGTTGAATCAAAATGCTCATTGTGAACTGCAGGTTGGGTTTTATAGTTACTCATGTGGTATGGCTGAGTTCATTGTCAAGGATGAAGTCAGAAAAGCTGTCAGTAATAGTCCTGGGATTGCTGCTGGGCTTGGGTGTGATGCATCAGTGCTTCTTGATTCCACTCCCTCAAACACTGCAGAGAAAGACTCTCCCGCAAATAAACCAAGTCTTCGAGGGTACGAAGTCATTGATCATGCCAAGGCTAAACTTGAAGCAGTGTGTCCTGGGATTGTTTCTTGTGCTGACATTCTTGCATTTGCAGCAAGGGACAGTGTGGAGTTAGCTGAAGGGCTTGGTTATGATGTTCCAGCAGGTAGAAGAGATGGCCGAATCTCACTAGCTTCAGACACAAGAACAGAGTTACCTCCTCCAACCTTTAATGTAAACCAGCTCACTCAACTCTTCGCAAGGAAGGGATTAACACAGGATGAAATGGTCACCCTCTCAGGAGCACACACCATTGGCCGCTCTCATTGCTCAAGTTTCAGCAAGAGATTGTACAATTTCAGTGCCAGTTCTAGACAGGATCCAAGTTTAGATCCCTCATATGCAGTACGGCTGAAGCGGCAATGTCCACAAGGCAGCACAAACCCAAACTTGGTGGTTCCAATGAACCCTTCAAGTCCTGGAATAGCAGATGTAGGCTACTATGTTGACATATTAGAAAACCGAGGCCTGTTCACGTCTGACCAGACTCTCTTAACCAATGCTGAAACAGCCAGCCAGGTGGAGCAAAATGCCAGGGATAGCTATCAATGGGCAAGCAAATTTGCCGATGCTATGGTTAAGATGGGTCAAATCAGTGTCTTAACAGGTAATGCTGGAGAGATTAGAACAAATTGCAGGGTGGTCAGTAGCTAG 978 0.4448 KKNNLKEKMRSTMLKCIISIVSVIYLLNQNAHCELQVGFYSYSCGMAEFIVKDEVRKAVSNSPGIAAGLGCDASVLLDSTPSNTAEKDSPANKPSLRGYEVIDHAKAKLEAVCPGIVSCADILAFAARDSVELAEGLGYDVPAGRRDGRISLASDTRTELPPPTFNVNQLTQLFARKGLTQDEMVTLSGAHTIGRSHCSSFSKRLYNFSASSRQDPSLDPSYAVRLKRQCPQGSTNPNLVVPMNPSSPGIADVGYYVDILENRGLFTSDQTLLTNAETASQVEQNARDSYQWASKFADAMVKMGQISVLTGNAGEIRTNCRVVSS 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01999 325 ProSiteProfiles Plant heme peroxidase family profile. 34 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu10g01999 325 Gene3D - 38 323 - -
Vimu10g01999 325 FunFam Peroxidase 69 173 - -
Vimu10g01999 325 Gene3D Peroxidase, domain 2 161 303 - -
Vimu10g01999 325 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu10g01999 325 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu10g01999 325 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu10g01999 325 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu10g01999 325 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu10g01999 325 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu10g01999 325 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu10g01999 325 PRINTS Plant peroxidase signature 44 63 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu10g01999 325 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu10g01999 325 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu10g01999 325 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu10g01999 325 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu10g01999 325 CDD secretory_peroxidase 34 323 IPR033905 GO:0004601|GO:0042744
Vimu10g01999 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Vimu10g01999 325 PANTHER PEROXIDASE 25-RELATED 23 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu10g01999 325 FunFam Peroxidase 161 303 - -
Vimu10g01999 325 Pfam Peroxidase 69 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu10g01999 325 SUPERFAMILY Heme-dependent peroxidases 34 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01999 Vimu-Chr10 29250506 29251776 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g01999 14 325 Peroxidase AT1G05260 46.809 2.65e-88 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01999 K00430 - gmx:100779031 542.732