Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01996 TTGACTGTGATCTCTCATAAGCAAAAGGTTGCGTTGAGGGATGCCTACAAGAACAAAAAGTACTTGTCCCTTGATCTCCGCCCCAAGAAGACCAAGGCTATTCGAAGGAGGCTTACTACGCACCAAGCTCAGGAATGGGCTGCAGTTGTTGGTAGCCAAGCCACCACCTTTGCAACCCAATTCCATGGGGGCACACTACCCACCATTCTGGTCATTGAATTCCTTGATATTTCCTTTGTGGAGCAGCAAAGGAGCATGGAGAAAGACCTAGAGAAGAAGAAATACCCTGGTGGTGTTTTTTATCCTTTGGGGACTATGGAGAAAGGAAAATATAGCTTCGGTTAA 345 0.4638 MTVISHKQKVALRDAYKNKKYLSLDLRPKKTKAIRRRLTTHQAQEWAAVVGSQATTFATQFHGGTLPTILVIEFLDISFVEQQRSMEKDLEKKKYPGGVFYPLGTMEKGKYSFG 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01996 114 Gene3D Chlorophyll a/b binding protein domain 30 112 - -
Vimu10g01996 114 PANTHER 60S RIBOSOMAL PROTEIN L35 2 44 IPR045059 GO:0000463|GO:0022625
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01996 Vimu-Chr10 29195306 29196804 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g01996 42 104 Chloroplast and Mitochondria Gene Families AT3G54890 69.841 1.13e-24 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01996 K08907 - vum:124841839 98.9821