Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01986 ATGGGACTGTTCTATTATGGTCTGCGAGATACGTCAGCTACTTACTCTGTCAATTTTCTGAGCTTGGTTCCTATCTCCACTTTCATTTTCTCTATTATATGCAGAATGGAGAGAGTGGAGATTGGAAGATGGACGAGTAAAGTGAAGACAATAGGAGCAACTTTGTGTGTTGGGGGAGCATTAACAACTAGTCTCTACAAAGGGAAGGAATTCTATATTGGTCTAACTACCCATCATTCACACACTGCATCACTTCACTCATCCAAACTCAACATGCTTCGTGGCACTCTTTTTTTGCTCGGTAGCTGCTTCTCATACACAGCTTGGTTCATCGTTCAAGTCAAGTTGCTTGAAATATATCCATTCAAATATTGGGGAACAATGCTTACGTGCATTATAGCATCAATTCAAGCAGTAATAGTCGGAATATGCTTAGATTGCAGAAAAGTTACTTGGAGTTTAAACTGGAATCTACAACTTATCACCATAATATACTCGGGAACATTGGCCACAGCTGCTACGTTTTGCTTAATTTATTGGGCAATTTCAATCAAAGGACCAACTTATCCCACAATGTTCAATCCATTGGCTCTTATTTTTGTGACCATATCAGAAGCTATCTTACTGGGTGAACCAATCAGTCTTGGCATCTTGGTGGGCATGATTTTGATCCTAACGGGGTTGTACTCATTTTTGTGGGGAAAAGAAAAAGAGACAGAAAGTATGGTTGAAGTTTGTGGAGAGGTTTCAACAGGCATGGCACGAGACTCTCTTGGAGTTCATTCCACAGCCATGGTGGTACCCAGTATTTCACCTACTAATCACAAAAACGATACAAATTGA 843 0.4021 MGLFYYGLRDTSATYSVNFLSLVPISTFIFSIICRMERVEIGRWTSKVKTIGATLCVGGALTTSLYKGKEFYIGLTTHHSHTASLHSSKLNMLRGTLFLLGSCFSYTAWFIVQVKLLEIYPFKYWGTMLTCIIASIQAVIVGICLDCRKVTWSLNWNLQLITIIYSGTLATAATFCLIYWAISIKGPTYPTMFNPLALIFVTISEAILLGEPISLGILVGMILILTGLYSFLWGKEKETESMVEVCGEVSTGMARDSLGVHSTAMVVPSISPTNHKNDTN 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01986 280 PANTHER WAT1-RELATED PROTEIN 2 239 IPR030184 GO:0016020|GO:0022857
Vimu10g01986 280 Pfam EamA-like transporter family 94 231 IPR000620 GO:0016020
Vimu10g01986 280 SUPERFAMILY Multidrug resistance efflux transporter EmrE 152 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01986 Vimu-Chr10 28953687 28955576 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g01986 3 236 Nodulin-like Gene Family AT1G09380 35.124 1.36e-43 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01986 - - vun:114164630 519.62