Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01974 ATGGAAGAGGCCAAGGTGGTTTTGTTAGGCGCAGGGTTCAGTATGTTTGGGATGAGAGCTAAGATAGCTTTGGCAGAGAAAGGAATAAAATATGAGTACATGGAAGAAGATCTCACCAACAAGAGCCCCTTGCTTCAAGAAATGAATCCAATTTACAAGAAAATTCCAGTTCTCATACATCATGGAAGACCAATATGTGAGTCCTTAATCATTGTTGAGTATATTGACATGGTTTGGCACAACAATTCTCCTTTGCTCCCCTTGGATCCCTACCTCAAAGCACAAGCCAAGTTCTGGGCTGATTTTGTAGATCAGAAGGTGTATCATGCTTCTAAGAGACTGTGGATTTCTAAGGGAGATGAGCAAGAGGTGGCAAAGAAGAACTTTCTAGAGAGCTTGAAACATTTGGAGGAGTTTCTTGGAGACAAACCTTATTTTGGTGGAGACACATTTGGGTTTGTTGATGTTGCTCTCATTCCTTTCTATTGCTGGTTTTATACCTATGAGACCTTTGGCAATTTCAAAGTGGAGGCTGTGTGTCCAAAACTTATCTCCTGGGCTAAGAGATGCATGCAAAAGGAAAGTGTATTTGAAACTCTTGCAGATGAAAAGGAGGTTTATGAGGCTGTTTTGGATTATAAGACAAAATTTATATTGAACTAA 663 0.3997 MEEAKVVLLGAGFSMFGMRAKIALAEKGIKYEYMEEDLTNKSPLLQEMNPIYKKIPVLIHHGRPICESLIIVEYIDMVWHNNSPLLPLDPYLKAQAKFWADFVDQKVYHASKRLWISKGDEQEVAKKNFLESLKHLEEFLGDKPYFGGDTFGFVDVALIPFYCWFYTYETFGNFKVEAVCPKLISWAKRCMQKESVFETLADEKEVYEAVLDYKTKFILN 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01974 220 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Vimu10g01974 220 Pfam Glutathione S-transferase, N-terminal domain 7 76 IPR004045 -
Vimu10g01974 220 SFLD Main (cytGST) 1 217 - -
Vimu10g01974 220 CDD GST_C_Tau 90 213 IPR045074 GO:0004364|GO:0006749
Vimu10g01974 220 SUPERFAMILY GST C-terminal domain-like 80 215 IPR036282 -
Vimu10g01974 220 SFLD Main.3: Omega- and Tau-like 1 217 IPR045073 -
Vimu10g01974 220 SUPERFAMILY Thioredoxin-like 5 108 IPR036249 -
Vimu10g01974 220 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 9 207 IPR045073 -
Vimu10g01974 220 FunFam Tau class glutathione S-transferase 1 88 - -
Vimu10g01974 220 CDD GST_N_Tau 6 79 - -
Vimu10g01974 220 FunFam Glutathione S-transferase U20 89 220 - -
Vimu10g01974 220 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 217 IPR010987 -
Vimu10g01974 220 Pfam Glutathione S-transferase, C-terminal domain 125 189 - -
Vimu10g01974 220 Gene3D Glutaredoxin 2 88 - -
Vimu10g01974 220 Gene3D - 89 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01974 Vimu-Chr10 28787536 28788284 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g01974 5 218 Glutathione S-transferase Gene Family AT1G78380 59.346 9.57e-97 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01974 K00799 - gmx:548030 407.912