Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01945 ATGTTGCTGACAATGATGGAAGAAGTACGATGGAGGAACTCAAACAGCCAAGTTAAAGTGTTAGGAACAATAGCATCAATTGCAGGAGAATTTATTGTGATACTGTACAAGGGTCCACTCATCTTTAAGAAACATTCGACTAACTTTTCTAACCAAATCCTTCAATTTTTAACACAGCTAAATTGGATCTTAGGAGGGATATTCTGCATTGCAGATTCACTTTTTTTACTTCAATGTGGTACATATATCAGGTTGCTTTTCCTTTTCAATCAAACACTGTTTACCATGAAGAAAAATGGCTTGACTCTTGTTTATAAGAAATTTAAGTTATTTTATCAGACCAGTTGA 348 0.3391 MLLTMMEEVRWRNSNSQVKVLGTIASIAGEFIVILYKGPLIFKKHSTNFSNQILQFLTQLNWILGGIFCIADSLFLLQCGTYIRLLFLFNQTLFTMKKNGLTLVYKKFKLFYQTS 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01945 115 PANTHER WAT1-RELATED PROTEIN 2 75 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01945 Vimu-Chr10 28228887 28231521 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g01945 6 78 Nodulin-like Gene Family AT5G40240 37.179 7.07e-10 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01945 - - gmx:100792109 99.7525