Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01937 ATGGGAACTATTGTTATGGATGCCACTGAACGAGTCGTTAGAGGGTGGCGCGTCCTCAACACCGGCTCCCCCATTACTGTGCCTATTGGTAGGGCTACCCTTGGCCGTATCACTAATAAGGGTGACCTCACAACCGAGCATTATTTGCCTATTCATAAAGAAGCTCTTTCTTTTGTTGAGCAAGCAACTGAGCAGAAAAACATTTATATGGAAGAGAGAGAAAAAGTTGAACTGGAGAGAGAAAAACTTGTACAACAGAGAGGAGGGAAGAGAAAAAGTACCCCACATCGAAACCAATTCAACCATCACCACCACCACCCCATTCCAGAATCAGATCCAAACCCTCAAATCCCCTCCATAATCCAATCAACTAGGGGCAAGTCCACCATATCCTCCCTGCTCCTGTGCACTTTCTCCAACAATACTCCCTCCTCCAATAATGACATCGCCATAATCAATGCCACTGCCCAAAGCAAGAAAAAAACCAACTTTTCCGCAGCAACCTCACAGGGTTGCACTATCGAAGCGTCACAACAGGTGTTGGTGTCGGCAGTGATTCGCTCCTCCGCCGATTGGCAAGGTAAGAAAACAACAAAGAAGAAGTACAAGAGAACTATTAAGTCTCTGGCAAGTGTACCAGATCGTTATCAAGTAATATATAAACGGTAA 669 0.4544 MGTIVMDATERVVRGWRVLNTGSPITVPIGRATLGRITNKGDLTTEHYLPIHKEALSFVEQATEQKNIYMEEREKVELEREKLVQQRGGKRKSTPHRNQFNHHHHHPIPESDPNPQIPSIIQSTRGKSTISSLLLCTFSNNTPSSNNDIAIINATAQSKKKTNFSAATSQGCTIEASQQVLVSAVIRSSADWQGKKTTKKKYKRTIKSLASVPDRYQVIYKR 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01937 222 MobiDBLite consensus disorder prediction 81 121 - -
Vimu10g01937 222 Coils Coil 59 86 - -
Vimu10g01937 222 Gene3D - 1 70 - -
Vimu10g01937 222 PANTHER ATP SYNTHASE 3 66 - -
Vimu10g01937 222 MobiDBLite consensus disorder prediction 89 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01937 Vimu-Chr10 27949688 27950965 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g01937 101 193 C3H Transcription Factor Family AT1G73760 39.362 7.29e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01937 - K02133 vum:124831997 166.777