Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01893 CAAAACATGGCTTCGTTTTGTTCTAGATTAACTATGAGTTTGGTTCTGTTTCTCCTCGTACTGGGGTGTGTCAATGCACAACTTTCTACCGATTTCTACTACAGTTCTTGCCCAAAACTCCTCTCCACTGTGAGATCCACAGTGCAATCTGCCATATCAAAGGAGACCCGTATGGGTGCTTCTCTCCTACGCTTGTTCTTCCACGATTGCTTTGTCAATGGATGTGACGGTTCTATTCTTTTGGATGACACATCAAGCTTCACCGGGGAGAAGAACGCAAACCCCAACAGGAACTCTGCTCGTGGATATGAAGTCATTGACAGCATAAAATCAGCCGTCGAGAAAGTCTGTCCGGGAGTTGTTTCCTGTGCAGATATCCTTGCCATTGCCGCCAGAGACTCTGTTCAAATCCTCGGAGGCCCCAGTTGGAATGTTAAACTTGGAAGAAGAGATTCTAGAACTGCTAGCCAATCTGCTGCCAACAATGGCATTCCTGCACCTACTTCAAACCTTAACCAACTCATCTCAAGATTCAGTGCTCTGGGACTTTCCACAAAGGATTTGGTCGCCTTGTCGGGTGGTCACACAATTGGACAAGCAAGGTGCACAAATTTCAGAGGCCGCATCTACAACGAGAGCAACATAGATAGCTCATTTGCAAGGACAAGGCAATCGAGCTGCCCCAGAACATCAGGGTCAGGGGACAACAATCTGGCACCCCTGGATGTTCAGACTCCGACCACATTTGACAACTACTACTTCAGGAACCTGGTTCAGAAGAAGGGTCTTCTCCACTCTGACCAACAACTCTTCAATGGTGGCTCCACTGACTCCATAGTGCGTGGCTACAGCACCAATCCAAGCTCCTTTTCCTCTGATTTTGTATCCGCAATTATCAAGATGGGAGACATTAGCCCCCTCACTGGCTCCAAAGGAGAAATCAGAAACAACTGCAGAAGGATTAACTAA 969 0.4727 QNMASFCSRLTMSLVLFLLVLGCVNAQLSTDFYYSSCPKLLSTVRSTVQSAISKETRMGASLLRLFFHDCFVNGCDGSILLDDTSSFTGEKNANPNRNSARGYEVIDSIKSAVEKVCPGVVSCADILAIAARDSVQILGGPSWNVKLGRRDSRTASQSAANNGIPAPTSNLNQLISRFSALGLSTKDLVALSGGHTIGQARCTNFRGRIYNESNIDSSFARTRQSSCPRTSGSGDNNLAPLDVQTPTTFDNYYFRNLVQKKGLLHSDQQLFNGGSTDSIVRGYSTNPSSFSSDFVSAIIKMGDISPLTGSKGEIRNNCRRIN 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01893 322 FunFam Peroxidase 31 174 - -
Vimu10g01893 322 FunFam Peroxidase 165 301 - -
Vimu10g01893 322 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Vimu10g01893 322 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Vimu10g01893 322 ProSiteProfiles Plant heme peroxidase family profile. 27 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu10g01893 322 PANTHER PEROXIDASE 72-RELATED 23 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu10g01893 322 CDD secretory_peroxidase 27 321 IPR033905 GO:0004601|GO:0042744
Vimu10g01893 322 Pfam Peroxidase 44 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu10g01893 322 SUPERFAMILY Heme-dependent peroxidases 27 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vimu10g01893 322 Gene3D Peroxidase, domain 2 165 301 - -
Vimu10g01893 322 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu10g01893 322 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu10g01893 322 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu10g01893 322 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu10g01893 322 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu10g01893 322 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu10g01893 322 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu10g01893 322 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu10g01893 322 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu10g01893 322 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu10g01893 322 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu10g01893 322 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu10g01893 322 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu10g01893 322 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu10g01893 322 Gene3D - 31 319 - -
Vimu10g01893 322 MobiDBLite consensus disorder prediction 221 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01893 Vimu-Chr10 27241554 27242773 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g01893 24 322 Peroxidase AT5G05340 77.258 2.79e-176 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01893 K00430 - gmx:100803637 572.392