Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01847 ATGGAGATAAATATGAGAAAAATGGAAGAAGCAACCAATAAATCGGATGACTACATAGTATGCTATGCACCTACCATGATAACAACAAATGGGGTGTGGCAAGGAGACAACCCTTTGGATTATTCTCTCCCTCTTTTCATCTTGCAATTGACTTTAGTTGTGATTGCCACCCGCTTATTTGTGTTCATTCTCAAACCTTTTCGCCAGCCACGCGTAATTGCTGAAGTCTTGGGTGGACTAATATTGGGTCCTTCGGTGCTTGGACAAAACGAAACATTTGCCAATGCAGTGTTTCCTCTAAGAAGTGTTATGGTGATTGAAACAATGGCAAATATTGGTCTCCTCTATTTTCTGTTCTTGGTAGGGGTGGAAATGGACATAACAGTGATGCGAAGCGTGGGTAGAAAAGCTGTGGCTTCGGCAGTGGCTGGCATGATTTTACCTTTCCTTGTTGGAGTGGCTTTCTCCTACCTTTTGGCCAAAAAAACTGATACCCATATAAACCAAGGCACATACATCCTATTCCTTGGTGTTGCTCTCTCTGTCACTGCATTTCCTGTCCTTGCTAGGATCCTGGCTGAGCTTAAACTCGTTAACACAGAGTTGGGGAAGCTTGCTCTTTCAGCTGCACTCATCAATGACGTGTGTGCTTGGGTTCTGTTAGCTTTGGCCATTGCACTAGCTGAGAACAATGCAGCTTCCTTGGCTTCTCTCTGGGTTCTACTCTCTGGTGCTGCATTTGTGGCCTTTTGTATTTTTGCTGTTCGACCAGCAGTTGAATGGCTGATTAGGAAAACCCCTGAAGGAGAAACTTTCAGTGAGTTTTATATATCTCTTATTCTAGCTGGGGTCATGGTCTCAGGCTTCATCACTGATGCAATTGGAACTCATTCTGTTTTTGGAGCTTTTGTGTTTGGTTTGGTAATCCCAAATGGACCACTCAGTTTTACTCTTGTGGAAAAGCTTGAGGACTTTGTTTCCGGACTTCTGCTACCTCTCTTTTTTGCCATAAGTGGGCTAAAAACCAACCTAGCACTCATCAATGGCTCATACACCTGGGCGATTCTTATTCTAGTCATTTTTCTAGCCTGCATTGGCAAAATTCTTGGCACCCTATTGATTGCAATGCTTTATCAAATGCCTATACGTGAAGGAGCTGCCCTTGGTTTACTCATGAACACAAAAGGTCTCGTTGAAATGGTCGTGCTTAATGTTGGGAAGGACCAGAAGGTTTTTAATGAAGAATCATTTGCAGTTATGGTCGTTATAACAGTGATAATGACTGCCATTATTGTACCTGCCATATCAATCATTTATAGGCCCTCAAGAAGCAGCATATATTACAAAAGAAGAACAATTGAGATATCAAAATCAGATACTGAGTTCAGACTCCTAGTGTGCATTCACACCCCTCGAAACGTTCCGACAATGATAAACCTTCTTGAAGCCTCTAACCCATCAAAGAACTCCCCAATATGTGCCTATGTGCTCCATCTGGTAGAACTCAGTGGTCGAACATCAGCCATGCTCATTGTTCACAACACAGCAAAACAAGACCTCCCTGCCCTTAACAGAACCGAAGCTCAATCTGATCACATAATCAAAGCCTTTGAAAACTACGAGCAGCATGCTTCATTCATCGCAGTTCAGCCCTTGACAGCTATCTCTCCCTATTCTACCATGCATGAAGACATATGCAATTTGGCAGCAGACAAACGTGTGTCCCTCATCATTGTTCCTTTTCATAAACAACAAACAGTCGATGGTGGCATGGAAGCTACAAACATGGCCTATAGAGCCATCAACCAGAATGTACTAGCAAATTCACCTTGCTCAGTAGGAATTCTAGTAGATAGAGGCTTAAGTGGCTCTAACCGTTTGGCTGGAAATCAAGTATCTCATCACGTAGCAGTATTATTTTTCGGAGGCCCAGATGATAGAGAGGCATTGTGCTATGGATGGAGAATGATGGAACATCCAAGGATTAGCCTCACCATAATGCGTTTTCTCCCAGGTGAACAGGCAGAGCCATCGTGCCCACAACAAGACAGCAAAAATGTGGATGGACAAAGGATGCTGACAGTGCAAACAGACAGGGATATACAGAAGAAACTTGATGAAAAACTTATACAAGAATTTAGGATGTCATATGGGAGTGATGATGCAGTTGATTACGTTGAGAAGGTAGTTAACAATGGGGAAGAAACAGTGGCTGCAATAAGGAGCATGGATGATGTTCATGATCTTTTCGTTGTTGGGAGAGGTCAAGGGATGATATCACCTCTCACTGCAGGACTCACCGATTGGAGTGAATGTCCTGAAATGGGGGCCATTGGAGATTTGCTAGCATCTTCAGATTTTGCTGCCACTGCTTCAGTTTTGGTGGTGCAACAATATGTTGGGCAAGTATATGCAGGAACGGAAACACCTAATGGTGATGACTATATCGATTTTAGCCATTGTTCTACATCACCTGCACCTAAAGTATACAGTTAG 2496 0.4303 MEINMRKMEEATNKSDDYIVCYAPTMITTNGVWQGDNPLDYSLPLFILQLTLVVIATRLFVFILKPFRQPRVIAEVLGGLILGPSVLGQNETFANAVFPLRSVMVIETMANIGLLYFLFLVGVEMDITVMRSVGRKAVASAVAGMILPFLVGVAFSYLLAKKTDTHINQGTYILFLGVALSVTAFPVLARILAELKLVNTELGKLALSAALINDVCAWVLLALAIALAENNAASLASLWVLLSGAAFVAFCIFAVRPAVEWLIRKTPEGETFSEFYISLILAGVMVSGFITDAIGTHSVFGAFVFGLVIPNGPLSFTLVEKLEDFVSGLLLPLFFAISGLKTNLALINGSYTWAILILVIFLACIGKILGTLLIAMLYQMPIREGAALGLLMNTKGLVEMVVLNVGKDQKVFNEESFAVMVVITVIMTAIIVPAISIIYRPSRSSIYYKRRTIEISKSDTEFRLLVCIHTPRNVPTMINLLEASNPSKNSPICAYVLHLVELSGRTSAMLIVHNTAKQDLPALNRTEAQSDHIIKAFENYEQHASFIAVQPLTAISPYSTMHEDICNLAADKRVSLIIVPFHKQQTVDGGMEATNMAYRAINQNVLANSPCSVGILVDRGLSGSNRLAGNQVSHHVAVLFFGGPDDREALCYGWRMMEHPRISLTIMRFLPGEQAEPSCPQQDSKNVDGQRMLTVQTDRDIQKKLDEKLIQEFRMSYGSDDAVDYVEKVVNNGEETVAAIRSMDDVHDLFVVGRGQGMISPLTAGLTDWSECPEMGAIGDLLASSDFAATASVLVVQQYVGQVYAGTETPNGDDYIDFSHCSTSPAPKVYS 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01847 831 FunFam Cation/H(+) antiporter 15 45 446 - -
Vimu10g01847 831 Gene3D - 45 445 IPR038770 -
Vimu10g01847 831 PANTHER CATION/H + ANTIPORTER 20 800 - -
Vimu10g01847 831 Pfam Sodium/hydrogen exchanger family 53 431 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01847 Vimu-Chr10 26323808 26326798 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g01847 5 801 Antiporter Super Family AT2G13620 69.511 0.0 1131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01847 K26731 - gmx:100818927 1334.32