Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01840 ATGAACATGGTGATATGCCACAGTTTCGCGGTGCTGGTTCACTGCTGTGCATGGAAGGAGACTTGTTTTGAGGGGAATCCGAACACAGGAATGAAAGTGAAAAAGACTCGTTCGGTGTCGGTGGACTCAGACCCGTTCGGTGTCGATGGACTCAGACCCGTTCGGTGGTCTTTATCCACAAACCATGAACTTAGAGATGTTGTTTTGCTTGTTTTTTCCAACAAGCAAGATCTTCCTAATGCAATGAATGCTGCGAAAACAACCGAAGATCTTGGTCTTCATTCAATCCGTCAATGTCACTGGTGGGCATCAATAGTTCTTACAACCCTGTTGATTCGAAGTGCTATAGTTCCACTCTTAATTAATCAACTTAAGGCCACTTCTAAACTTATGATCATGATGACTGTTGTGGATGACCTTGTATCTGTGGACACCCTCATCGAAGAACGCCTGACAGTTGAGCCATGCAACGAGTATAATTGA 483 0.4431 MNMVICHSFAVLVHCCAWKETCFEGNPNTGMKVKKTRSVSVDSDPFGVDGLRPVRWSLSTNHELRDVVLLVFSNKQDLPNAMNAAKTTEDLGLHSIRQCHWWASIVLTTLLIRSAIVPLLINQLKATSKLMIMMTVVDDLVSVDTLIEERLTVEPCNEYN 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01840 160 PANTHER ADP RIBOSYLATION FACTOR-RELATED 58 102 IPR024156 GO:0005525
Vimu10g01840 160 Pfam ADP-ribosylation factor family 58 108 IPR006689 GO:0003924|GO:0005525
Vimu10g01840 160 Gene3D - 42 132 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01840 Vimu-Chr10 26194480 26197494 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g01840 129 159 Eukaryotic Initiation Factors Gene Family AT2G18110 77.419 1.80e-09 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01840 K07937 K07938 atri:130798775 70.8626