Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01799 ATGAAAGGAAACAATCCCTATTTGGTCGTGATTCTCATACAAGCCATATATGCTGCCATGTTTCTTCTCTCAAAAGCAGCATTCGATCATGGCATGAACAATTTCATCTTCGTCTTCTATAGACAGGCAATAGCAACCATCTTTTTGACCCCTTTCACTTTCTTCTTCGAATGGAAAACGGCACCTCCTATGCCCTTTTGGACCTTCTGCAAGATTTTCTTCCTTTCTTTCTTTGGGATCACTTTAAGCTTGGACGTATATGGTATCGGGCTTATTTACACCTCAGCAACTTTAGCTGCTGCTACCACAAACTGTCTTCCAGTTATCACCTTCTTCTTGGCACTCCTACTAAGGATTGAGAGTCTGAAAATAAAGACCACCTCAGGGATTGCTAAGTTAATAGGCATTGTGGCATGTTTGGGTGGTGCAGCAACCCTTGCCTTTTATAAAGGTCCTTCTTTAAGATTCTTAAGTCATTTTCACCTTTTGGATTATCACAAAGGCCTACAACATCAAGGTCATGCTCAATCGGGTGCATGGATAAAGGGTTGTTTCATCATGCTCCTCTCCAACACTTTTTTTGGGCTATGGCTTGTACTGCAGGCTTTTATTATAAAAGGGTACCCTTCAAAGCTACTCTTCACAACTCTTCAGTGTTTCTTAAGCTCAATTCAGTCTTTGGTTATTGCCTTGGCAGTAGAAAGAGACTTTGAGCAATGGAAGTTGGGTTGGAATATCAGACTCCTCGCAGTAATATACTGTGGAATTATGGTGACTGGTGTCACATATTACTTACAAACATGGGTCATAGAGAAAAAAGGACCTGTGTTTCTAGCGATGTCAACCCCACTTGCTCTTATCATTACAATTTTGGCCTCTGCAACTGTCTTTGGAGAGATTATCAGTTTGGGAAGTGTTCTTGGAGGAATGGTGTTGATTCTTGGACTGTACAGCGTGTTGTGGGGAAAGAACAGGGAACATATGCCAAAAGGCACACAAGACGTGGAGCTACAGGCATCTGGAAAATGA 1029 0.4179 MKGNNPYLVVILIQAIYAAMFLLSKAAFDHGMNNFIFVFYRQAIATIFLTPFTFFFEWKTAPPMPFWTFCKIFFLSFFGITLSLDVYGIGLIYTSATLAAATTNCLPVITFFLALLLRIESLKIKTTSGIAKLIGIVACLGGAATLAFYKGPSLRFLSHFHLLDYHKGLQHQGHAQSGAWIKGCFIMLLSNTFFGLWLVLQAFIIKGYPSKLLFTTLQCFLSSIQSLVIALAVERDFEQWKLGWNIRLLAVIYCGIMVTGVTYYLQTWVIEKKGPVFLAMSTPLALIITILASATVFGEIISLGSVLGGMVLILGLYSVLWGKNREHMPKGTQDVELQASGK 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01799 342 Pfam EamA-like transporter family 6 135 IPR000620 GO:0016020
Vimu10g01799 342 Pfam EamA-like transporter family 182 320 IPR000620 GO:0016020
Vimu10g01799 342 PANTHER WAT1-RELATED PROTEIN 6 328 IPR030184 GO:0016020|GO:0022857
Vimu10g01799 342 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 149 - -
Vimu10g01799 342 SUPERFAMILY Multidrug resistance efflux transporter EmrE 238 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01799 Vimu-Chr10 25396451 25399845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g01799 1 254 Nodulin-like Gene Family AT5G64700 60.853 5.20e-98 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01799 - - gmx:100804562 630.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g01799 10 25396451 25399845 Vimu10g01799 10 25396451 25399845 ECH
Vimu11g04139 11 63045464 63049175 Vimu10g01799 10 25396451 25399845 PCT