Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01678 ATGGAGGAGAAATTGTCAGCAAAGCGAGATAAAAGCCATGTTTTGTTCGGTGGGACGAAAATATTCCAGCATACCCCAGATAAGAGTTTTCCTCTTAAAACTCCTGACGGTGGCTGCTTGGCTGATGTCCTGAGAACGGATTTTGAAACAAGTCAAGGAAAGTTGATGCGAACAATCTTATTCTCTACAGAAAGGCTAAACTGGGAAAGTGGATTGTTCATTTTATTCTTGGTTGTGTTTGCTCTTATTGCTGCTGGTTATGTGCTTGTTAAGGGGCTGGAAGATCCCACAAGGAGCAAGTATAAACTAATACTAAGTTGTTCACTTATTGTTACTTCTGTGATACCTCCTGAGTTACCAATGGAATTATCGATAGCTGTTAATACTTCTCTTATTGCCCTGGCACGGCGTGGGATTTTTTGCACAGAGCCTTTTCGGATACCATTTGCTGGAAAGGTTGATATATGTTGTTTTGACAAGACAGGGACACTTACATCTGATGATATGGAATTTTCTGGAGTTGTTGGGTTGAATGGAACTACAGATTTGGAGTCTGATACAAGTAGAGTGCCTGTACGAACAGTTGAAATCCTGGCTTCTTGCCATGCATTGGTGTTTGTTGAGAATAAGCTGTTTTTAGGCTTGGCTATAGTATTGAACGAAATGGATCCTTCTAATGGAAAGAAAACTTGA 693 0.404 MEEKLSAKRDKSHVLFGGTKIFQHTPDKSFPLKTPDGGCLADVLRTDFETSQGKLMRTILFSTERLNWESGLFILFLVVFALIAAGYVLVKGLEDPTRSKYKLILSCSLIVTSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDICCFDKTGTLTSDDMEFSGVVGLNGTTDLESDTSRVPVRTVEILASCHALVFVENKLFLGLAIVLNEMDPSNGKKT 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01678 230 Gene3D - 37 46 - -
Vimu10g01678 230 Gene3D - 154 168 IPR023214 -
Vimu10g01678 230 PANTHER CATION-TRANSPORTING ATPASE-RELATED 2 211 IPR006544 GO:0006812|GO:0016020|GO:0019829|GO:0140358
Vimu10g01678 230 ProSitePatterns E1-E2 ATPases phosphorylation site. 159 165 IPR018303 -
Vimu10g01678 230 Gene3D - 47 153 - -
Vimu10g01678 230 SUPERFAMILY Calcium ATPase, transmembrane domain M 69 151 IPR023298 -
Vimu10g01678 230 NCBIfam HAD-IC family P-type ATPase 72 179 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g01678 2 211 Primary Pumps ATPases AT5G23630 84.507 5.73e-121 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01678 K14950 - vum:124821481 394.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g01678 10 22526773 22527914 Vimu10g01678 10 22526773 22527914 ECH