Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01593 ATGCTCTTGGCCTACCAAAGCCTTGGTGTGGTATATGGGGACTTGAGCATTTCTCCTTTGTATGTGTACACGAGCACATTTGCCGAAGATATTGAACATTCAGAGACCAATGAAGAGATTTTTGGTACCCTCTCTTTTGTATTCTGGACTCTGACACTGGTGCCACTCTTCAAATACGTTTTTGTAGTTCTTAGAGCTGATGATAATGGAGAAGGTAAGCTTTTGAATGAACATGAGGGAAGCCAATATGCTGCTTCAGCTCTTGTTGATGGTTTTCTTGCATGGCTCTGCAGGTGGTACGTTTGCTCTATATTCCTTGATTTGTAG 327 0.422 MLLAYQSLGVVYGDLSISPLYVYTSTFAEDIEHSETNEEIFGTLSFVFWTLTLVPLFKYVFVVLRADDNGEGKLLNEHEGSQYAASALVDGFLAWLCRWYVCSIFLDL 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01593 108 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 2 73 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vimu10g01593 108 Pfam K+ potassium transporter 5 73 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01593 Vimu-Chr10 17977668 17977994 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g01593 1 72 Inorganic Solute Cotransporters AT2G40540 87.500 6.89e-39 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01593 K03549 - gmx:100806122 144.05