Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01592 ATGTCTGATGCTGTGATTCCCATCACTTGCTTCATACTGGTTTGTTTGTTCGCACTGCAACACTATGGTACACATAGGGTGGGATTCCTTTTTGCTCCAATTGTGTTAGCATGGCTGTTGTGCATCAGCACACTTGGTCTATATAATATATTCAAATGGAATCCACATGTATATAAAGCTCTTTCGCCATATTATATGTTCAAGTTTTTGAAGAAGACAAGGATAAGTGGATGGATGTCTTTGGGGGGAATATTGCTGTGCATAACAGGTAAATATAGAAAATTCATCTATATAGTTAAATATAATATCTTGGACGGTACTCCTGCATAA 330 0.3697 MSDAVIPITCFILVCLFALQHYGTHRVGFLFAPIVLAWLLCISTLGLYNIFKWNPHVYKALSPYYMFKFLKKTRISGWMSLGGILLCITGKYRKFIYIVKYNILDGTPA 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01592 109 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 3 91 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vimu10g01592 109 Pfam K+ potassium transporter 2 90 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01592 Vimu-Chr10 17976797 17977465 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g01592 4 102 Inorganic Solute Cotransporters AT2G40540 76.768 1.15e-50 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01592 K03549 - gmx:100806122 188.348