LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu10g01575	ATGGAAGACGTGGTGGTTGTTCATGAACTGCACATATGGGCCATTACAATCGGAAAGGTTTTACTAGCTTGTCATGTTAAAATCAGAAGTGAAGCAGATGCAAACGTGGTGTTGGACAAGGTTATAGACTATATCAAACGGGTCTATAACATTGGTCATAATCATTGTTGGACTAAAAGCATGGATGGTTTCTTAAAGTTTTTAGTTTCCACATTTGGTCTTGTGGTTAATATCATCATGGCTTTGTTATTGGGTCATGATCATGGCCATGGACATGATGGTCATGGTCATGGACATAGACACGAACATGGACATGATGGTCACAGACATGGACATGGACATGGATATTGCCATAGTCATGGGTTTATAATTTCAAACCATCATGATGCAAAACATGAAAAAGTTGAGCACCATTACACACATGACCATACAGACCATCACAATGATCATCATTCGAAAGATGAGCACCATCATGATCAACAAGAGCTTACTCAATCTTTTCTTGATGAATCTAAAACTAAGAAGAAGAACCAATGTAACATAAATGTACATGGGGCTTATCTCCATGTCCTTGGAGACTCTAGCCAAAGTATTCAAGTAATGATTGAGGGAGCGAGAATGCCTTGTGAGATAGATGCTACTAAGATAGAAAGGGGATTGTTGGATATGGAAGATGTGGTGGTTGTTCATGAACTGGATATAAACTATAACAAATATAAAACAGTGAGTTCTATCACACACGGTCACATTCAGAGTTGTGGTGAGCACACGGTCAAGAGAGCAATGGACGCCTAA	795	0.3925	MEDVVVVHELHIWAITIGKVLLACHVKIRSEADANVVLDKVIDYIKRVYNIGHNHCWTKSMDGFLKFLVSTFGLVVNIIMALLLGHDHGHGHDGHGHGHRHEHGHDGHRHGHGHGYCHSHGFIISNHHDAKHEKVEHHYTHDHTDHHNDHHSKDEHHHDQQELTQSFLDESKTKKKNQCNINVHGAYLHVLGDSSQSIQVMIEGARMPCEIDATKIERGLLDMEDVVVVHELDINYNKYKTVSSITHGHIQSCGEHTVKRAMDA	264

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu10g01575	264	MobiDBLite	consensus disorder prediction	91	112	-	-
	Vimu10g01575	264	MobiDBLite	consensus disorder prediction	138	165	-	-
	Vimu10g01575	264	PANTHER	CATION EFFLUX PROTEIN/ ZINC TRANSPORTER	1	53	-	-
	Vimu10g01575	264	MobiDBLite	consensus disorder prediction	93	112	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vimu10g01575	Vimu-Chr10	17787541	17789680	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vimu10g01575	1	53	Inorganic Solute Cotransporters	AT2G46800	79.245	2.81e-21	90.1

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu10g01575	K14689		-	gmx:100794876	139.043