Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01574 ATGACAGTGATCCTTTGTGCTATTTTTATGACTATTGAAGTGGTTGATGGCATCAAAGTTAACAGTCTTGATATATTAACTGATGCAGCACATTTGTTTTCTGATTTTGCAACCTTTGCCATCTCCTTATTTTCTTTGTGGGCTGCTACTGGATGGGAAGCTATACCTCGCCATGCCTTGGTTTCTATCCAATTAATATGGTTGCTTGCTGGTATTATGTTATATGAAGCCATTGATAAAATCATTGTTGGTCCTAAAAGTGTGGATGGTTTCTTAATGTTTTTAGTTTCCGCGTTTGGTCCTGTGGTTAATATCATCATGGCTTTGTTATTGGGTCATGATCATGGCCATGGACATGATGGTCATGTCATGGATACAGACACAAACATGGACATGGCCATAGGCATGGATTTACAATTCTTACCCATCATGATGCAAAACATGCAAAAGATGAGCACCATCATGATCACCAAGAGCTTACTCAATCTCTTCTTGATGAATAAAAAAAGAAGCAATGGAACATAA 525 0.379 MTVILCAIFMTIEVVDGIKVNSLDILTDAAHLFSDFATFAISLFSLWAATGWEAIPRHALVSIQLIWLLAGIMLYEAIDKIIVGPKSVDGFLMFLVSAFGPVVNIIMALLLGHDHGHGHDGHVMDTDTNMDMAIGMDLQFLPIMMQNMQKMSTIMITKSLLNLFLMNKKRSNGT 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01574 174 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 2 126 - -
Vimu10g01574 174 Pfam Cation efflux family 3 118 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Vimu10g01574 174 Gene3D Cation efflux protein transmembrane domain 1 165 IPR027469 -
Vimu10g01574 174 SUPERFAMILY Cation efflux protein transmembrane domain-like 2 123 IPR027469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01574 Vimu-Chr10 17786743 17787300 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g01574 1 112 Inorganic Solute Cotransporters AT2G46800 65.854 2.72e-44 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01574 K14689 - gmx:100794876 172.94