Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01573 ATGTCCTCCGAAGACATCACCCTCGTCCCCGACCAGAGGATCGAGAACGGTCTCAGCTCCCCTCTTGTCTTCCAAGACGACCCTCTCCGCTTCAATTGCCCCACGCCGCAGCGTCGGGTCGGAGACCCAGGTCCTAAAACCCGTGAACTCGGCGCCTTCATCGACGAGAAGATGTTCATCGACCGCGATCGCTTCTTCACCGCCCAGAACCCCGACTTCCGCCGCTACGCCGAGTGCTCCTCCCGCCAAGACCCCCGCAATTGGACCGTCAACGGGACCGCCGCCACTCCCAGCGAGGACGACGAATCCGACGAGGACGACGAAGATGACGACGACGAGGACGACGACGAAGGCGATACGGAAGTTGAAGGACTCGTCGGTGGTGGAAGCAAAAGGGAAATTATCGCTAACAACAACGGTGGCGGTGGTAATTTGCCTTCTGTTGCAAACGGGAAAGCTCACGCTTTTGTTTCAGGGAGAGAGCTGTTGGGGAAGGATGGTGGAGAGATTGGGCAGTTGGTGCTTAGCAATGTGAATGGTGGTGGTGATGAAGATCATCGGCAAGAGGGGTTAGGTAAGTCTCAGAATTCTGTTACCGTTGCTGAAACTGACTGTGAGGAGTACTATTCGCACTATCTTCAAGGTGCTGATGGGGCTTCTGGCCACAAAGTTATGATGGATGATGGTGGTTGTGGGTTTAGTGGGAGAAAGGATGCAATGTATTCTACCGAGTCAGGGGAATCACTCAGGAATATTCTTTCAGATCCTGTTACTGATCCTTTGATTAACTTGGATGGGCAGTCCAAATGGAAAATTATGGAATGCGTTTTGAGAAGAATTATTGATGAAGTTGACAAAAATTTCAAGAAAGCTTGCTGCACCTGTTCTCAACCCACAACCGAGGAATCAATATCTCCAAACCTATCACTTCGAGCGGCTGTGCAAGCATATCGTCGGGAAGAGGAGTCTCAATTCTACCGATCGCCTAAAAGAAGAAGAGAGAGATTTGATCAGGGTGGATTTGGAGACTCATCTGTTATGGAACCATCAAGGAGTAGAGGTGTTCAGTTTCCGTATGCTGTTATGGACCGGGTTGTCATAAAGGGAAACAAAAGGACACCACAACGCTTTGTTGGGCGTGAAGCGATTGTAACAACGCAATGCCTGAATGGATGGTATGTAGTGAAGACATTGGACAATGCAGAGAGTGTAAAGTTACAGTATCGGTCACTCGCTAAGGTTTTGGATGGTACTTCAAAGCCTTCCTCCAGCAAGTTGTCACCTAATTGGCTTTAG 1296 0.5008 MSSEDITLVPDQRIENGLSSPLVFQDDPLRFNCPTPQRRVGDPGPKTRELGAFIDEKMFIDRDRFFTAQNPDFRRYAECSSRQDPRNWTVNGTAATPSEDDESDEDDEDDDDEDDDEGDTEVEGLVGGGSKREIIANNNGGGGNLPSVANGKAHAFVSGRELLGKDGGEIGQLVLSNVNGGGDEDHRQEGLGKSQNSVTVAETDCEEYYSHYLQGADGASGHKVMMDDGGCGFSGRKDAMYSTESGESLRNILSDPVTDPLINLDGQSKWKIMECVLRRIIDEVDKNFKKACCTCSQPTTEESISPNLSLRAAVQAYRREEESQFYRSPKRRRERFDQGGFGDSSVMEPSRSRGVQFPYAVMDRVVIKGNKRTPQRFVGREAIVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVLDGTSKPSSSKLSPNWL 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01573 431 MobiDBLite consensus disorder prediction 98 122 - -
Vimu10g01573 431 MobiDBLite consensus disorder prediction 82 97 - -
Vimu10g01573 431 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 4 425 - -
Vimu10g01573 431 MobiDBLite consensus disorder prediction 78 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01573 Vimu-Chr10 17767366 17774662 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g01573 19 431 Plant U-box Gene Family AT5G05230 40.278 7.01e-66 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01573 - - gmx:100786717 629.017