Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu10g01559 | ATGAACAAGACCCTCGTCACAGAGCTTCTTCTCGGTCTCGACTATGCCACTCAGCTCAAGTTCTTGCTTCAGAAACCTGTTGACCCAGATGCCTCTGTTGCAGCTAAGGAACTAGTTACCAATGTGCACAGATCTTTCGCTCAAACTCTCTCTATCTTGACTTCCCACCCTGCCAGGGCTCAAGACCAGGTTGCTCAGAATCTCTTGATTTCTGGGGAAGATGCCTCGCAGGCTGCAAGCATTGATCACAGGTCTCACGATTCAACTGAGAGTAGAAAGAGATCGTTTCCCCTCTCAAAGGATCGAAGAGGTTCCTACAAAAGAAGGTCTTACTTCACTCTTTCTCATTTCCCTTCCTCAAGAAAGCCTGTTTTGTCAGTGATTGGGGAGGTGGTGTTGAGAGGATTTGGTGATTTGGGATGTGTACGGACGGAGTCCTTGAAGACTGAACAGACATGGACCATAGTTTCCCACACTACTGATGATAATCATGCGTGGAGAAAGTACGGACAGAAGGATATTCTAAATTCTCAGTTTCCCAGGAGTTACTTCAGATGTACTAGGAAGTTTGAACAAGGTTGCAAAGCCACCAAACAAGTGCAACGGTTAGAAGAGAATCCTGATATGTACAATATTACGTACATTGGGTTTCACACATGCAAAGACATCCTCAAGGCTCCACAAATGGTCACATGTTCTGAAACTTGGGACTCCTTTCTTGAGAATTCCCATGAAGACTTAAATGTTCCAAATGAACAAAAGCAACACGATCCTCCTATGAGATCACAAAGCCCAATTGTTAAACAAGAATGTCTCAATGATGAGACTGATCCCAGTGATCTTACAGATGCCAACCTGTGGTCTGATTTGAAGGATTTTGAACTGTCCAATGACAAGCCTGCCTTGAAAATATCATCTGAAAATGCAGATGCATTCATGTACTTGCTCTCGGAGTTTGGACATGAATTTTGA | 972 | 0.4383 | MNKTLVTELLLGLDYATQLKFLLQKPVDPDASVAAKELVTNVHRSFAQTLSILTSHPARAQDQVAQNLLISGEDASQAASIDHRSHDSTESRKRSFPLSKDRRGSYKRRSYFTLSHFPSSRKPVLSVIGEVVLRGFGDLGCVRTESLKTEQTWTIVSHTTDDNHAWRKYGQKDILNSQFPRSYFRCTRKFEQGCKATKQVQRLEENPDMYNITYIGFHTCKDILKAPQMVTCSETWDSFLENSHEDLNVPNEQKQHDPPMRSQSPIVKQECLNDETDPSDLTDANLWSDLKDFELSNDKPALKISSENADAFMYLLSEFGHEF | 323 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu10g01559 | 323 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 22 | 250 | IPR044810 | GO:0003700 | |
Vimu10g01559 | 323 | SUPERFAMILY | WRKY DNA-binding domain | 157 | 221 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Vimu10g01559 | 323 | SMART | WRKY_cls | 160 | 222 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vimu10g01559 | 323 | Pfam | WRKY DNA -binding domain | 161 | 221 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vimu10g01559 | 323 | Gene3D | WRKY domain | 146 | 215 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Vimu10g01559 | 323 | MobiDBLite | consensus disorder prediction | 79 | 102 | - | - | |
Vimu10g01559 | 323 | ProSiteProfiles | WRKY domain profile. | 161 | 218 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vimu10g01559 | 323 | MobiDBLite | consensus disorder prediction | 75 | 102 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu10g01559 | Vimu-Chr10 | 17430163 | 17432168 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu10g01559 | 5 | 261 | WRKY Transcription Factor Family | AT3G56400 | 36.015 | 5.30e-40 | 140 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Vimu10g01559 | WRKY | 1.2e-24 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu10g01559 | - | - | vun:114164744 | 490.73 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vimu1g01757 | 1 | 18771433 | 18777028 | Vimu10g01559 | 10 | 17430163 | 17432168 | PCT |